RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 TMEM109Q9BVC6 243 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 PODXLO00592 558 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 PDXKO00764 312 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 NR3C1P04150 777 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 PLCG2P16885 1265 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
SMCR5-201ENST00000543475 CHRNA3P32297 505 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 SOX5P35711 763 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 MSH2P43246 934 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 CASP4P49662 377 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 ATP11AP98196 1134 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 BNIP1Q12981 228 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 AADACL2Q6P093 401 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 CCDC25Q86WR0 208 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
SMCR5-201ENST00000543475 KIF9Q9HAQ2 790 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMCR5-201ENST00000543475 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
SMCR5-201ENST00000543475 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 VCAM1P19320 739 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 PTGIRP43119 386 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SLC12A3P55017 1021 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 EXOC3L1Q86VI1 746 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 WDR66Q8TBY9 1149 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ARHGEF26Q96DR7 871 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SAAL1Q96ER3 474 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 MXD3Q9BW11 206 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
SMCR5-201ENST00000543475 HOXD13P35453 343 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SIK1P57059 783 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ITPK1Q13572 414 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
SMCR5-201ENST00000543475 THAP2Q9H0W7 228 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
SMCR5-201ENST00000543475 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
SMCR5-201ENST00000543475 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
SMCR5-201ENST00000543475 ABCA3Q99758 1704 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 CLIC2O15247 247 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 MED24O75448 989 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 RARGP13631 454 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 STAT3P40763 770 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 PPP4CP60510 307 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 GIT2Q14161 759 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 TNFAIP8L3Q5GJ75 292 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 LRRC47Q8N1G4 583 aaKnown RBP13.52□□□□□ -0.24
SMCR5-201ENST00000543475 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 CNKSR1Q969H4 720 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 ARL2BPQ9Y2Y0 163 aa13.52□□□□□ -0.24
SMCR5-201ENST00000543475 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 GTPBP10A4D1E9 387 aaKnown RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 HGSO14964 777 aaPredicted RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 LDHCP07864 332 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 HSPA6P17066 643 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 TNFAIP3P21580 790 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 GRIK5Q16478 980 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 LONRF1Q17RB8 773 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ASPRV1Q53RT3 343 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ANKRD20A3Q5VUR7 823 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 CDCA2Q69YH5 1023 aaPredicted RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 MFSD5Q6N075 450 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 CCDC137Q6PK04 289 aaKnown RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 SPATA21Q7Z572 469 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 UBL4BQ8N7F7 174 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 PRELID2Q8N945 189 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ARHGEF2Q92974 986 aaKnown RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 MLXIPLQ9NP71 852 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
SMCR5-201ENST00000543475 PCYOX1Q9UHG3 505 aa13.52□□□□□ -0.25
SMCR5-201ENST00000543475 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 O00370 1275 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
SMCR5-201ENST00000543475 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SMCR5-201ENST00000543475 RFC4P35249 363 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 SARNPP82979 210 aaKnown RBP13.51□□□□□ -0.25
SMCR5-201ENST00000543475 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 FITM2Q8N6M3 262 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 ANKRD42Q8N9B4 389 aa13.51□□□□□ -0.25
SMCR5-201ENST00000543475 STK33Q9BYT3 514 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms