RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 DNAAF3Q8N9W5 541 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 PRPF31Q8WWY3 499 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF560Q96MR9 790 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 PASKQ96RG2 1323 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 PLSCR1O15162 318 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 DNAJC6O75061 913 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 TFRCP02786 760 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 RGS2P41220 211 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF579Q8NAF0 562 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 TMEM35BQ8NCS4 154 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 POLD4Q9HCU8 107 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 MAP3K20Q9NYL2 800 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 LRRD1A4D1F6 860 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 EBAG9O00559 213 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 MAGEB2O15479 319 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 DGAT1O75907 488 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 SAT1P21673 171 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 MAPK8P45983 427 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 GCLCP48506 637 aaPredicted RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 GCLMP48507 274 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 SEPT6Q14141 434 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 KYAT1Q16773 422 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 WHAMMP3Q1A5X7 153 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 CAPN12Q6ZSI9 719 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 TOGARAM2Q6ZUX3 1019 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 NDUFAF2Q8N183 169 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 TTC39CQ8N584 583 aa7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 SRBD1Q8N5C6 995 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 FNDC3AQ9Y2H6 1198 aaKnown RBP7.41□□□□□ -1.22
SRGAP1-206ENST00000543397 MEGF6O75095 1541 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 SPDYE2BA6NHP3 402 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 SPDYE6P0CI01 402 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 YWHABP31946 246 aaKnown RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 TPD52P55327 224 aaPredicted RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 DBN1Q16643 649 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 KCTD6Q8NC69 237 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 GDAP1Q8TB36 358 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 PGBD4Q96DM1 585 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 PLCB1Q9NQ66 1216 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 SUCLA2Q9P2R7 463 aaPredicted RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 FER1L4A9Z1Z3 1794 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 PDHBP11177 359 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 FOSL1P15407 271 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 GBP1P32455 592 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 PPP4CP60510 307 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 ZBED6P86452 979 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 RPS6KA2Q15349 733 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 CDO1Q16878 200 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 MAP1SQ66K74 1059 aaPredicted RBP7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 KIF12Q96FN5 646 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 DPH5Q9H2P9 285 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 RSPH14Q9UHP6 348 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 SCINQ9Y6U3 715 aa7.4□□□□□ -1.22
SRGAP1-206ENST00000543397 UPP2O95045 317 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 ALDH1A1P00352 501 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 SCP2P22307 547 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 CAP2P40123 477 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 NNMTP40261 264 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 YWHAGP61981 247 aaKnown RBP eCLIP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 COASYQ13057 564 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 MXD4Q14582 209 aaPredicted RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 RWDD4Q6NW29 188 aaKnown RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 SDCCAG8Q86SQ7 713 aaPredicted RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 TTC30AQ86WT1 665 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 PROM2Q8N271 834 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 ANKRD42Q8N9B4 389 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 GPT2Q8TD30 523 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 MAGOHBQ96A72 148 aaKnown RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 ZDHHC15Q96MV8 337 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 NCAPGQ9BPX3 1015 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 SAMSN1Q9NSI8 373 aaKnown RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 STRIP2Q9ULQ0 834 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 GSTA1P08263 222 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 GSTA2P09210 222 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 CPT1AP50416 773 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 DYNLT1P63172 113 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 RESP18Q5W5W9 173 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 LRRC31Q6UY01 552 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 ARHGEF18Q6ZSZ5 1173 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 HAUS6Q7Z4H7 955 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 AFG1LQ8WV93 481 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 UBN1Q9NPG3 1134 aa7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 RBAKQ9NYW8 714 aaPredicted RBP7.4□□□□□ -1.23
SRGAP1-206ENST00000543397 LRRIQ1Q96JM4 1722 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 CHGBP05060 677 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 PRKCBP05771 671 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 KLRK1P26718 216 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 GARSP41250 739 aaKnown RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 KNOP1Q1ED39 458 aaKnown RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 SCYL1Q96KG9 808 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 RUNDC3BQ96NL0 473 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 ACAP3Q96P50 834 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms