RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PCBP1Q15365 356 aaKnown RBP eCLIP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 FAM187BQ17R55 369 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TRIM60Q495X7 471 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 KMT5BQ4FZB7 885 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TPRNQ4KMQ1 711 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 HERC4Q5GLZ8 1057 aaPredicted RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 FAM47CQ5HY64 1035 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 MAEAQ7L5Y9 396 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 EPM2AIP1Q7L775 607 aaPredicted RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 KSR1Q8IVT5 923 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC65Q8IXS2 484 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 GRAMD1CQ8IYS0 662 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 LRRC71Q8N4P6 559 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 METTL13Q8N6R0 699 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TRIML1Q8N9V2 468 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 USP38Q8NB14 1042 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 SLC17A8Q8NDX2 589 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM174Q8WUU8 243 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PSPC1Q8WXF1 523 aaKnown RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 BSNDQ8WZ55 320 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 INO80BQ9C086 356 aaPredicted RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 FZD8Q9H461 694 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 CDHR5Q9HBB8 845 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 PARVGQ9HBI0 331 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 GPRC5CQ9NQ84 441 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 ARHGAP28Q9P2N2 729 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 TBX21Q9UL17 535 aa6.49□□□□□ -1.37
ABCF1-207ENST00000542772 MKI67P46013 3256 aaKnown RBP6.49□□□□□ -1.37
ABCF1-207ENST00000542772 A0A087WZ62 844 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC85CA6NKD9 419 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 FAM13AO94988 1023 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 SMC2O95347 1197 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 TIMP1P01033 207 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 VTNP04004 478 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 KRT18P05783 430 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 EIF4BP23588 611 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 EFNA5P52803 228 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 SMTNP53814 917 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 PEX3P56589 373 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 NLRP11P59045 1033 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 MRPS6P82932 125 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CACNB1Q02641 598 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 RAD51AP2Q09MP3 1159 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 STK4Q13043 487 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 COASYQ13057 564 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 BFSP2Q13515 415 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ALCAMQ13740 583 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CAPSQ13938 189 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 MORC3Q14149 939 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 TFDP1Q14186 410 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CAMK4Q16566 473 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 AMHR2Q16671 573 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CT47A1Q5JQC4 288 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ODR4Q5SWX8 454 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC183Q5T5S1 534 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF618Q5T7W0 954 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF658Q5TYW1 1059 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 PPP4R3CPQ6ZMV5 832 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 HAUS6Q7Z4H7 955 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 RHPN2Q8IUC4 686 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 MYCT1Q8N699 235 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 RNF149Q8NC42 400 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM161BQ8NDZ6 487 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 SMARCE1Q969G3 411 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 VWCEQ96DN2 955 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 IFT74Q96LB3 600 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC43Q96MW1 224 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 MAP7D2Q96T17 732 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 FDXACB1Q9BRP7 624 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 NOC4LQ9BVI4 516 aaKnown RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 POLR3FQ9H1D9 316 aaPredicted RBP6.48□□□□□ -1.37
ABCF1-207ENST00000542772 NUP62CLQ9H1M0 184 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 C2orf40Q9H1Z8 148 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 KMT5AQ9NQR1 393 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 RMND1Q9NWS8 449 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 PCDHB13Q9Y5F0 798 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 PHLPP2Q6ZVD8 1323 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ADGRA3Q8IWK6 1321 aa6.48□□□□□ -1.37
ABCF1-207ENST00000542772 ALPK3Q96L96 1907 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TRIM43BA6NCK2 446 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 PPP1R3GB7ZBB8 358 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 H0YCG3 227 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 K7ERI5 159 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 ACKR2O00590 384 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 EIF3DO15371 548 aaKnown RBP eCLIP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 PQBP1O60828 265 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 PIGRP01833 764 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CXCL10P02778 98 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CLTBP09497 229 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SRGAP2CP0DJJ0 459 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 IDEP14735 1019 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 DARSP14868 501 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SELPP16109 830 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms