RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 SCP2P22307 547 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CST5P28325 142 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZNF131P52739 623 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 XKR9Q5GH70 373 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TMEM63BQ5T3F8 832 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CEP170P1Q96L14 293 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KATNAL1Q9BW62 490 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 C17orf75Q9HAS0 396 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CYP26B1Q9NR63 512 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 SEPT9Q9UHD8 586 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TELO2Q9Y4R8 837 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 COL4A3BPQ9Y5P4 624 aa13.62□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DYNC1LI2O43237 492 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZEB2O60315 1214 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 SORBS3O60504 671 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KIF20AO95235 890 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 F2P00734 622 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 MAPTP10636 758 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 GIT2Q14161 759 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TARBP2Q15633 366 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KMT5BQ4FZB7 885 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZNF484Q5JVG2 852 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 C16orf70Q9BSU1 422 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 RUSC1Q9BVN2 902 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 OLFML3Q9NRN5 406 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 H3BRB1 525 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FAM13AO94988 1023 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ALADP13716 330 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 IDEP14735 1019 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CASP1P29466 404 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ABCD1P33897 745 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 COASYQ13057 564 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 STIM1Q13586 685 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FSCN1Q16658 493 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DYMQ7RTS9 669 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 SLC7A3Q8WY07 619 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KIFAP3Q92845 792 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 HLA-CQ95604 372 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DHX33Q9H6R0 707 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PARVGQ9HBI0 331 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TMEM39AQ9NV64 488 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PANK4Q9NVE7 773 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 LARSQ9P2J5 1176 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 SYNRGQ9UMZ2 1314 aa13.6□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FAM186AA6NE01 2351 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 BIN1O00499 593 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ZBTB39O15060 712 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ADAMTS4O75173 837 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 POLGP54098 1239 aaPredicted RBP13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 NPEPPSP55786 919 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ALCAMQ13740 583 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 GSE1Q14687 1217 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 LRRC41Q15345 812 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DPCR1Q3MIW9 517 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 FAM26FQ5R3K3 315 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PLA2G4FQ68DD2 849 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KCNN1Q92952 543 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 PHF24Q9UPV7 400 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 DMDP11532 3685 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 KAT6AQ92794 2004 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 UBE4BO95155 1302 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 CFAP47Q6ZTR5 3102 aa13.59□□□□□ -0.23
CACNA1C-IT3-201ENST00000542680 TPRP12270 2363 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 VPS13AQ96RL7 3174 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 IGKV6-21A0A0C4DH24 114 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 H0YCG3 227 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 HAS3O00219 553 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MAGEB2O15479 319 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 USO1O60763 962 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 HIP1RO75146 1068 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 MAFO75444 373 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 KRT37O76014 449 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 TIMP1P01033 207 aa13.58□□□□□ -0.24
CACNA1C-IT3-201ENST00000542680 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms