RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 GCOM2Q9BZD3 368 aaPredicted RBP17.39■□□□□ 0.37
RTN3-211ENST00000542238 CHST12Q9NRB3 414 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 ZFHX2Q9C0A1 2572 aaPredicted RBP17.38■□□□□ 0.37
RTN3-211ENST00000542238 CLASP2O75122 1294 aaKnown RBP17.38■□□□□ 0.37
RTN3-211ENST00000542238 CDC45O75419 566 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 CXCL14O95715 111 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 SKIP12755 728 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 CPA1P15085 419 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 FGFR4P22455 802 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 BCAR1P56945 870 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
RTN3-211ENST00000542238 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
RTN3-211ENST00000542238 POMKQ9H5K3 350 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 NID2Q14112 1375 aa17.38■□□□□ 0.37
RTN3-211ENST00000542238 NT5C1B-RDH14C9J2C7 533 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
RTN3-211ENST00000542238 GIT2Q14161 759 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 UGCGQ16739 394 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 MIER3Q7Z3K6 550 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 RDM1Q8NG50 284 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 SLC26A6Q9BXS9 759 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 INO80BQ9C086 356 aaPredicted RBP17.37■□□□□ 0.37
RTN3-211ENST00000542238 UNC45AQ9H3U1 944 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 FAM86C1Q9NVL1 165 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
RTN3-211ENST00000542238 SEPT9Q9UHD8 586 aaPredicted RBP17.37■□□□□ 0.37
RTN3-211ENST00000542238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 C2CD4DB7Z1M9 353 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 GFRA3O60609 400 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.372e-7■■■■■ 30.4
RTN3-211ENST00000542238 CSDE1O75534 798 aaKnown RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 PHKA2P46019 1235 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 TARBP2Q15633 366 aaKnown RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 MTERF2Q49AM1 385 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 ATAT1Q5SQI0 421 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 RARS2Q5T160 578 aaKnown RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 TWF2Q6IBS0 349 aaKnown RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 NIFKQ9BYG3 293 aaKnown RBP17.36■□□□□ 0.37
RTN3-211ENST00000542238 C22orf23Q9BZE7 217 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 SH3GLB2Q9NR46 395 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 CDH22Q9UJ99 828 aa17.36■□□□□ 0.37
RTN3-211ENST00000542238 PDGFBP01127 241 aaPredicted RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 IFNAR1P17181 557 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 NLRP5P59047 1200 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 RNASELQ05823 741 aaKnown RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 GLB1LQ6UWU2 654 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 DDX53Q86TM3 631 aaKnown RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 ZNF410Q86VK4 478 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 TRAIPQ9BWF2 469 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 ZBP1Q9H171 429 aa17.35■□□□□ 0.37
RTN3-211ENST00000542238 DBR1Q9UK59 544 aaKnown RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 PIN4Q9Y237 131 aaKnown RBP17.35■□□□□ 0.37
RTN3-211ENST00000542238 A0A087WZ62 844 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 H0Y858 1186 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 GALR2O43603 387 aaPredicted RBP17.34■□□□□ 0.37
RTN3-211ENST00000542238 PSMD10O75832 226 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 BRD1O95696 1058 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 WEE2P0C1S8 567 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 CTSAP10619 480 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 RAB27AP51159 221 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 DRP2Q13474 957 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 NTRK3Q16288 839 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 Q4G0T1 1027 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 KIAA1841Q6NSI8 718 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 ZDHHC14Q8IZN3 488 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 KCNB2Q92953 911 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 GJA10Q969M2 543 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 IGSF21Q96ID5 467 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
RTN3-211ENST00000542238 SUCLA2Q9P2R7 463 aaPredicted RBP17.34■□□□□ 0.37
RTN3-211ENST00000542238 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
RTN3-211ENST00000542238 USP34Q70CQ2 3546 aa17.33■□□□□ 0.37
RTN3-211ENST00000542238 IGKV6-21A0A0C4DH24 114 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 EDIL3O43854 480 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 RPS6KB1P23443 525 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 PSMA5P28066 241 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 HSPA4P34932 840 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 LONRF3Q496Y0 759 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
RTN3-211ENST00000542238 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 RHPN2Q8IUC4 686 aa17.33■□□□□ 0.36
RTN3-211ENST00000542238 C12orf76Q8N812 135 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms