RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 AGAP1Q9UPQ3 857 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 NOC2LQ9Y3T9 749 aaKnown RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 MKI67P46013 3256 aaKnown RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 CAND2O75155 1236 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 RPS12P25398 132 aaKnown RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 GBP2P32456 591 aaPredicted RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 STAT3P40763 770 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 STAT2P52630 851 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 LACTB2Q53H82 288 aaPredicted RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 FAM133BQ5BKY9 247 aaKnown RBP9.92□□□□□ -0.82
THBS3-211ENST00000541990 TMC3Q7Z5M5 1100 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 SCFD2Q8WU76 684 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 VPS33BQ9H267 617 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 TSKSQ9UJT2 592 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 LTBP3Q9NS15 1303 aa9.92□□□□□ -0.82
THBS3-211ENST00000541990 EME2A4GXA9 379 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 NFIBO00712 420 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 UPP2O95045 317 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 KIF4AO95239 1232 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 CLTAP09496 248 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 ZBTB48P10074 688 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 SATB1Q01826 763 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 CACNB1Q02641 598 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 SLC18A3Q16572 532 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 GPATCH4Q5T3I0 446 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 GKAP1Q5VSY0 366 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 TBC1D1Q86TI0 1168 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 METTL13Q8N6R0 699 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 PRCCQ92733 491 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 TACO1Q9BSH4 297 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 ELP3Q9H9T3 547 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 RNF14Q9UBS8 474 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 RIPK3Q9Y572 518 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 SRRM3A6NNA2 597 aaPredicted RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 A8MUI8 341 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 F8VZ95 297 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 SERPING1P05155 500 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 ASNSP08243 561 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 PAEPP09466 180 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 TNFAIP1Q13829 316 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 PLS1Q14651 629 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 CRYMQ14894 314 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 RPS6KA1Q15418 735 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 ECM1Q16610 540 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 LRCH2Q5VUJ6 765 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 ADAT2Q7Z6V5 191 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 FBXO11Q86XK2 927 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 NELFCDQ8IXH7 590 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 CCDC47Q96A33 483 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 OTUD5Q96G74 571 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 XPO6Q96QU8 1125 aaKnown RBP9.91□□□□□ -0.82
THBS3-211ENST00000541990 ATP8A1Q9Y2Q0 1164 aa9.91□□□□□ -0.82
THBS3-211ENST00000541990 POTECB2RU33 542 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 MEIS2O14770 477 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 BUB1BO60566 1050 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 USP2O75604 605 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 DNAJC8O75937 253 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 ALAS1P13196 640 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 PTPRAP18433 802 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 VCAM1P19320 739 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 KCNJ2P63252 427 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 VGLL4Q14135 290 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 NONOQ15233 471 aaKnown RBP eCLIP9.9□□□□□ -0.82
THBS3-211ENST00000541990 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 ATG4CQ96DT6 458 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 TRIM6Q9C030 488 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 RPAP3Q9H6T3 665 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 ABCF3Q9NUQ8 709 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 PANK4Q9NVE7 773 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 CEP72Q9P209 647 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 MYH4Q9Y623 1939 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 CCT8L1PA6NM43 557 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 CHN1P15882 459 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 EPHX2P34913 555 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 PTK2Q05397 1052 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 KLHL30Q0D2K2 578 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 ZNF571Q7Z3V5 609 aaPredicted RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 LRRC34Q8IZ02 419 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 AGAP11Q8TF27 550 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 ATP8B4Q8TF62 1192 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 TAF4BQ92750 862 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 CUL5Q93034 780 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 DCPSQ96C86 337 aaKnown RBP9.9□□□□□ -0.82
THBS3-211ENST00000541990 SELENOSQ9BQE4 189 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 ADAM7Q9H2U9 754 aa9.9□□□□□ -0.82
THBS3-211ENST00000541990 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 KRIT1O00522 736 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 BIRC3Q13489 604 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 CUL1Q13616 776 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 PRR16Q569H4 304 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 TREML2Q5T2D2 321 aa9.89□□□□□ -0.83
THBS3-211ENST00000541990 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms