RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RPLP2P05387 115 aaKnown RBP11.17□□□□□ -0.62
CHFR-220ENST00000541817 FGFR4P22455 802 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 SF3A2Q15428 464 aaKnown RBP11.17□□□□□ -0.62
CHFR-220ENST00000541817 ALX1Q15699 326 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 CSRP2Q16527 193 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 PARM1Q6UWI2 310 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
CHFR-220ENST00000541817 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 PPFIBP1Q86W92 1011 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
CHFR-220ENST00000541817 FGF14Q92915 247 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 NXPE3Q969Y0 559 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 IGSF21Q96ID5 467 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 GBP3Q9H0R5 595 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 LTB4R2Q9NPC1 389 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 IRAK3Q9Y616 596 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 FRMPD4Q14CM0 1322 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 STAM2O75886 525 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 RETP07949 1114 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 FOXC1Q12948 553 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 MTAPQ13126 283 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 AASDHQ4L235 1098 aaPredicted RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 ZBTB41Q5SVQ8 909 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 DDX1Q92499 740 aaKnown RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 STAMQ92783 540 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 LPPQ93052 612 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 CHMP4BQ9H444 224 aaKnown RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 PIDD1Q9HB75 910 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 ZBTB40Q9NUA8 1239 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 DNAJB4Q9UDY4 337 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
CHFR-220ENST00000541817 GCN1Q92616 2671 aaKnown RBP11.16□□□□□ -0.62
CHFR-220ENST00000541817 B4E1Z4 1266 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 TAF4O00268 1085 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 TM4SF5O14894 197 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 KCNK5O95279 499 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 GALTP07902 379 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 GIT2Q14161 759 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 SIM2Q14190 667 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 TRMT1LQ7Z2T5 733 aaKnown RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 EMILIN2Q9BXX0 1053 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 AZI2Q9H6S1 392 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 PRMT8Q9NR22 394 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
CHFR-220ENST00000541817 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
CHFR-220ENST00000541817 GIPC1O14908 333 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 HRO43593 1189 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 B4GALT3O60512 393 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 GPR32O75388 356 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 TDGF1P13385 188 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 ZSCAN20P17040 1043 aaPredicted RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 ITGB5P18084 799 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 SLC11A1P49279 550 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 CRYBB1P53674 252 aaPredicted RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 AK2P54819 239 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 NTHL1P78549 312 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 FZD5Q13467 585 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 NBR1Q14596 966 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 TAS1R1Q7RTX1 841 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 SMARCC2Q8TAQ2 1214 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 PI4K2BQ8TCG2 481 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 ESR2Q92731 530 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 CLDN23Q96B33 292 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
CHFR-220ENST00000541817 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
CHFR-220ENST00000541817 MEIS3P2A8K0S8 358 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 AXIN1O15169 862 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 LILRB3O75022 631 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 LRP3O75074 770 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 HOXC13P31276 330 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 STAT5BP51692 787 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 PRKCQQ04759 706 aa11.13□□□□□ -0.63
CHFR-220ENST00000541817 SOWAHCQ53LP3 525 aaPredicted RBP11.13□□□□□ -0.63
CHFR-220ENST00000541817 C19orf48Q6RUI8 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms