RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 HS2ST1Q7LGA3 356 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 HAUS6Q7Z4H7 955 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 KIF18AQ8NI77 898 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 AFG1LQ8WV93 481 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 ST6GALNAC4Q9H4F1 302 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 PPME1Q9Y570 386 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 ZMYM2Q9UBW7 1377 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 PCNTO95613 3336 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 LGALS16A8MUM7 142 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 SLC16A4O15374 487 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 TGFB1I1O43294 461 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 GNA14O95837 355 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 RPL13P26373 211 aaKnown RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 CYP2C19P33261 490 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 NPTX2P47972 431 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 NCKAP1LP55160 1127 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 LACTBP83111 547 aaPredicted RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 TNFAIP2Q03169 654 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 UBXN1Q04323 297 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 CCDC40Q4G0X9 1142 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 MIIPQ5JXC2 388 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 PRAMEF19Q5SWL8 479 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 FBXO38Q6PIJ6 1188 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 ZC3H3Q8IXZ2 948 aaKnown RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 SYCP3Q8IZU3 236 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 IFT74Q96LB3 600 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 NOC4LQ9BVI4 516 aaKnown RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 GBP3Q9H0R5 595 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 POLR3FQ9H1D9 316 aaPredicted RBP9.53□□□□□ -0.88
THBS3-210ENST00000541576 ERAP1Q9NZ08 941 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
THBS3-210ENST00000541576 NR3C1P04150 777 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 LGALS2P05162 132 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 CCZ1BP86790 482 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 CCZ1P86791 482 aaPredicted RBP9.52□□□□□ -0.88
THBS3-210ENST00000541576 GTF2BQ00403 316 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 BSNDQ8WZ55 320 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 TMEM206Q9H813 350 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 KMT5AQ9NQR1 393 aa9.52□□□□□ -0.88
THBS3-210ENST00000541576 CLIC2O15247 247 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 PPFIA4O75335 1185 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 PTPN14Q15678 1187 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 ERCC6LQ2NKX8 1250 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 GOLGA5Q8TBA6 731 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 TMEM143Q96AN5 459 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 ACCSQ96QU6 501 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 NTPCRQ9BSD7 190 aaKnown RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 ARHGAP39Q9C0H5 1083 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 KCNG1Q9UIX4 513 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 MGAMO43451 1857 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 ADCY6O43306 1168 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 MAFO75444 373 aaPredicted RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 ZNF865P0CJ78 1059 aaPredicted RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 SKILP12757 684 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 MAN2A1Q16706 1144 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 CCAR2Q8N163 923 aaKnown RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 CCDC150Q8NCX0 1101 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 TMEM161BQ8NDZ6 487 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 IPO4Q8TEX9 1081 aaKnown RBP9.52□□□□□ -0.89
THBS3-210ENST00000541576 KIFC3Q9BVG8 833 aa9.52□□□□□ -0.89
THBS3-210ENST00000541576 HBP1O60381 514 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 TBC1D8O95759 1140 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 SFPQP23246 707 aaKnown RBP eCLIP9.51□□□□□ -0.89
THBS3-210ENST00000541576 DNM2P50570 870 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 RBL2Q08999 1139 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 NFIL3Q16649 462 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 EXOC8Q8IYI6 725 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 TC2NQ8N9U0 490 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 CPLX3Q8WVH0 158 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 AGPAT3Q9NRZ7 376 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 DENND3A2RUS2 1198 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 MMP3P08254 477 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 ZNF286BP0CG31 522 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
THBS3-210ENST00000541576 ARL2P36404 184 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 GYS2P54840 703 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
THBS3-210ENST00000541576 VWA3BQ502W6 1294 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 EPC1Q9H2F5 836 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 ITIH6Q6UXX5 1313 aa9.51□□□□□ -0.89
THBS3-210ENST00000541576 A0A1W2PQC6 194 aa9.5□□□□□ -0.89
THBS3-210ENST00000541576 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
THBS3-210ENST00000541576 H0YCG3 227 aa9.5□□□□□ -0.89
THBS3-210ENST00000541576 SLC16A3O15427 465 aaKnown RBP9.5□□□□□ -0.89
THBS3-210ENST00000541576 DYNC1LI2O43237 492 aaPredicted RBP9.5□□□□□ -0.89
THBS3-210ENST00000541576 IGHA2P01877 340 aa9.5□□□□□ -0.89
THBS3-210ENST00000541576 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
THBS3-210ENST00000541576 SP3Q02447 781 aa9.5□□□□□ -0.89
THBS3-210ENST00000541576 KIF22Q14807 665 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms