RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RHOBTB1O94844 696 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 FBLN1P23142 703 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 PRAMEP78395 509 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 UBA6A0AVT1 1052 aaPredicted RBP16.32■□□□□ 0.2
HMGA2-210ENST00000541363 TEX28O15482 410 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 GRK2P25098 689 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 APOA5Q6Q788 366 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 MTERF3Q96E29 417 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 ZBED2Q9BTP6 218 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 SLFN12LQ6IEE8 588 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 FAM47EQ6ZV65 393 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 PARD6BQ9BYG5 372 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
HMGA2-210ENST00000541363 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
HMGA2-210ENST00000541363 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 TNIP2Q8NFZ5 429 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 PARVBQ9HBI1 364 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 SCN3BQ9NY72 215 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 CD109Q6YHK3 1445 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 CCDC188H7C350 402 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 PSMD2Q13200 908 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 SPDYAQ5MJ70 313 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 PSAPP07602 524 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 MXI1P50539 228 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 FASTKD1Q53R41 847 aaKnown RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 TAS2R42Q7RTR8 314 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 THAP9Q9H5L6 903 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 USP14P54578 494 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 CUL3Q13618 768 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 FMNL1O95466 1100 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 DCUN1D1Q96GG9 259 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 SLC13A1Q9BZW2 595 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 LRRIQ3A6PVS8 624 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 MEFVO15553 781 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 HMOX2P30519 316 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 CLK1P49759 484 aaKnown RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 AHI1Q8N157 1196 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-210ENST00000541363 SH3TC2Q8TF17 1288 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 SYBUQ9NX95 663 aa16.31■□□□□ 0.2
HMGA2-210ENST00000541363 TSPY1Q01534 308 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 ZNF507Q8TCN5 953 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 SEC24BO95487 1268 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 KIF23Q02241 960 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 KRR1Q13601 381 aaKnown RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 PFKFB2O60825 505 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 FGGP02679 453 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 SCFD1Q8WVM8 642 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 SOWAHDA6NJG2 315 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 ZNF189O75820 626 aaPredicted RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 ARL4DP49703 201 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
HMGA2-210ENST00000541363 ICE2Q659A1 982 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 NUDT18Q6ZVK8 323 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 STXBP3O00186 592 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 URGCPQ8TCY9 931 aa16.3■□□□□ 0.2
HMGA2-210ENST00000541363 GTF2H3Q13889 308 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 ITPRIPL1Q6GPH6 555 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 BRD8Q9H0E9 1235 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
HMGA2-210ENST00000541363 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 M0R3G1 203 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SERPIND1P05546 499 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 CTSWP56202 376 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 PRPF18Q99633 342 aaKnown RBP16.29■□□□□ 0.2
HMGA2-210ENST00000541363 ADCY9O60503 1353 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SERPINB4P48594 390 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 INPP5DQ92835 1189 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SLFNL1Q499Z3 407 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 GRAMD1AQ96CP6 724 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 TNKSO95271 1327 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
HMGA2-210ENST00000541363 MYO1CO00159 1063 aa16.29■□□□□ 0.2
HMGA2-210ENST00000541363 SOX6P35712 828 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms