RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 V9GY48 417 aaPredicted RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
CHFR-219ENST00000541341 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 AGPSO00116 658 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 STRNO43815 780 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
CHFR-219ENST00000541341 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 GHRP10912 638 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 FCER1AP12319 257 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 NR1D1P20393 614 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 ITGB8P26012 769 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CHFR-219ENST00000541341 MAGEA1P43355 309 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 TLE2Q04725 743 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 ZNF174Q15697 407 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 PKN1Q16512 942 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 OLFML2BQ68BL8 750 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 TTI2Q6NXR4 508 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 IQCKQ8N0W5 287 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 ATP6V1G3Q96LB4 118 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 PLCD4Q9BRC7 762 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 MROH8Q9H579 483 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 CXorf56Q9H5V9 222 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 SUGCTQ9HAC7 445 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 PLCB1Q9NQ66 1216 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 XPNPEP3Q9NQH7 507 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 PCDHA4Q9UN74 947 aa11.34□□□□□ -0.59
CHFR-219ENST00000541341 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
CHFR-219ENST00000541341 IGHA2P01877 340 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 SERPING1P05155 500 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 GNA11P29992 359 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 LIG3P49916 1009 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 KIF11P52732 1056 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
CHFR-219ENST00000541341 GRIN1Q05586 938 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 ACTN3Q08043 901 aaPredicted RBP11.33□□□□□ -0.6
CHFR-219ENST00000541341 FUT2Q10981 343 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 MAATS1Q7Z4T9 603 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 SHCBP1Q8NEM2 672 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 CCDC26Q8TAB7 109 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 CAPZA3Q96KX2 299 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 ANKRD27Q96NW4 1050 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 NAP1L3Q99457 506 aaPredicted RBP11.33□□□□□ -0.6
CHFR-219ENST00000541341 CDX2Q99626 313 aaPredicted RBP11.33□□□□□ -0.6
CHFR-219ENST00000541341 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 FAM129AQ9BZQ8 928 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 CAPN7Q9Y6W3 813 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 LCTP09848 1927 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 VCANP13611 3396 aa11.33□□□□□ -0.6
CHFR-219ENST00000541341 ENC1O14682 589 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 GFPT2O94808 682 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 RARBP10826 455 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 LSP1P33241 339 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 TROAPQ12815 778 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 SNCBQ16143 134 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 CCDC40Q4G0X9 1142 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 VPS36Q86VN1 386 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 CEP120Q8N960 986 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 CEP63Q96MT8 703 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 TTYH1Q9H313 450 aaPredicted RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
CHFR-219ENST00000541341 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 GRIN2DO15399 1336 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
CHFR-219ENST00000541341 A0A087X0B3 334 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 A0A1W2PQ45 241 aaPredicted RBP11.31□□□□□ -0.6
CHFR-219ENST00000541341 A0A1W2PQY0 241 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 GMNCA6NCL1 334 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
CHFR-219ENST00000541341 GSTA1P08263 222 aa11.31□□□□□ -0.6
CHFR-219ENST00000541341 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
CHFR-219ENST00000541341 MCM7P33993 719 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms