RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MBLAC1A4D2B0 266 aaPredicted RBP10.34□□□□□ -0.75
DDX55-208ENST00000541259 FAM13AO94988 1023 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SMC2O95347 1197 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 MYL1P05976 194 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 BMP6P22004 513 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 ARL2P36404 184 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 EHHADHQ08426 723 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 COASYQ13057 564 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 COL13A1Q5TAT6 717 aaPredicted RBP10.34□□□□□ -0.75
DDX55-208ENST00000541259 NT5DC1Q5TFE4 455 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SFR1Q86XK3 245 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 KSR1Q8IVT5 923 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 METTL13Q8N6R0 699 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 GLIS3Q8NEA6 775 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 MCPH1Q8NEM0 835 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 ZNF668Q96K58 619 aaPredicted RBP10.34□□□□□ -0.75
DDX55-208ENST00000541259 CTAGE1Q96RT6 745 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 FGFBP2Q9BYJ0 223 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SENP6Q9GZR1 1112 aaPredicted RBP10.34□□□□□ -0.75
DDX55-208ENST00000541259 POLR3FQ9H1D9 316 aaPredicted RBP10.34□□□□□ -0.75
DDX55-208ENST00000541259 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 PPME1Q9Y570 386 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 ARVCFO00192 962 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 MAGEB2O15479 319 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 TBCAO75347 108 aaKnown RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 RHOBTB3O94955 611 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 CYP2C9P11712 490 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 GLRA2P23416 452 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 NMT1P30419 496 aaKnown RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 ZNF131P52739 623 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 STK4Q13043 487 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 MORC3Q14149 939 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 HERC4Q5GLZ8 1057 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 IER5Q5VY09 327 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 SESTD1Q86VW0 696 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 CCDC65Q8IXS2 484 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 SMYD4Q8IYR2 804 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 KIAA0319LQ8IZA0 1049 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 PRPF31Q8WWY3 499 aaKnown RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 WNT8BQ93098 351 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 PAWRQ96IZ0 340 aaKnown RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 GSDMAQ96QA5 445 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 PPP1R16BQ96T49 567 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 TIPINQ9BVW5 301 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 TRPV6Q9H1D0 765 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 SLC39A2Q9NP94 309 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 TRMT13Q9NUP7 481 aaKnown RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 SUCLA2Q9P2R7 463 aaPredicted RBP10.33□□□□□ -0.76
DDX55-208ENST00000541259 GDAQ9Y2T3 454 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 PCDHA2Q9Y5H9 948 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
DDX55-208ENST00000541259 VTNP04004 478 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 GNAT1P11488 350 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 COL6A1P12109 1028 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 PLS3P13797 630 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 GAP43P17677 238 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 CDK7P50613 346 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 CASP5P51878 434 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 PEX3P56589 373 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 TMEM62Q0P6H9 643 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 LAMTOR4Q0VGL1 99 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 KCNB1Q14721 858 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 PTGISQ16647 500 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 ODR4Q5SWX8 454 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 SLC39A5Q6ZMH5 540 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 RHPN2Q8IUC4 686 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 EXOC8Q8IYI6 725 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 RETREG2Q8NC44 543 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 DNAJB3Q8WWF6 145 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 TCP11Q8WWU5 503 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 KIFAP3Q92845 792 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 FUCA2Q9BTY2 467 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 EXOC1Q9NV70 894 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 ADGRA3Q8IWK6 1321 aa10.32□□□□□ -0.76
DDX55-208ENST00000541259 SCN5AQ14524 2016 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 CCDC169A6NNP5 214 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 SLC16A4O15374 487 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 GAS2O43903 313 aaKnown RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 B4GALT4O60513 344 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 ZMYND10O75800 440 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 LETM1O95202 739 aaPredicted RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 SRGAP2CP0DJJ0 459 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 MYBP10242 640 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 NPTX2P47972 431 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 DNM2P50570 870 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 NLRP12P59046 1061 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 PTPN11Q06124 597 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms