RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 TOMM70O94826 608 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 UBTFL1P0CB47 393 aaPredicted RBP7.86□□□□□ -1.15
TTR-203ENST00000541025 GLI4P10075 376 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 PAMP19021 973 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 TACR1P25103 407 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 RFX5P48382 616 aaPredicted RBP7.86□□□□□ -1.15
TTR-203ENST00000541025 ZNF143P52747 638 aaPredicted RBP7.86□□□□□ -1.15
TTR-203ENST00000541025 VMACQ2NL98 169 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 DPY19L1Q2PZI1 675 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 LRRC24Q50LG9 513 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 ZKSCAN2Q63HK3 967 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 VHLLQ6RSH7 139 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 CABP7Q86V35 215 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 LZTR1Q8N653 840 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 EYA3Q99504 573 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 TAF1DQ9H5J8 278 aaPredicted RBP7.86□□□□□ -1.15
TTR-203ENST00000541025 RTEL1Q9NZ71 1219 aa7.86□□□□□ -1.15
TTR-203ENST00000541025 LRRFIP2Q9Y608 721 aaKnown RBP7.86□□□□□ -1.15
TTR-203ENST00000541025 ZNF804BA4D1E1 1349 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 STXBP3O00186 592 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 PSMD14O00487 310 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 IPO8O15397 1037 aaKnown RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 FOXD2O60548 495 aaPredicted RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 NAT2P11245 290 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 NCAM1P13591 858 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 EPS15P42566 896 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 GMPSP49915 693 aaPredicted RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 TAF7LQ5H9L4 462 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 LDHAL6AQ6ZMR3 332 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 C16orf71Q8IYS4 520 aaPredicted RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 CRACR2BQ8N4Y2 399 aaPredicted RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 YTHDC1Q96MU7 727 aaKnown RBP7.85□□□□□ -1.15
TTR-203ENST00000541025 CNNM1Q9NRU3 951 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 AKT3Q9Y243 479 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 RIPOR2Q9Y4F9 1068 aa7.85□□□□□ -1.15
TTR-203ENST00000541025 IQCA1LA6NCM1 817 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 OTOL1A6NHN0 477 aaPredicted RBP7.84□□□□□ -1.15
TTR-203ENST00000541025 PLIN1O60240 522 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 EPHX2P34913 555 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 SLC9A5Q14940 896 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 POMZP3Q6PJE2 187 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 ZNF513Q8N8E2 541 aaPredicted RBP7.84□□□□□ -1.15
TTR-203ENST00000541025 VGLL2Q8N8G2 317 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 NETO2Q8NC67 525 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 TSPAN17Q96FV3 270 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 ANKRD2Q9GZV1 360 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 GPRC5DQ9NZD1 345 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 HACL1Q9UJ83 578 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 RCAN3Q9UKA8 241 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 NUDT5Q9UKK9 219 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 HCFC2Q9Y5Z7 792 aa7.84□□□□□ -1.15
TTR-203ENST00000541025 NPHP3-ACAD11A0A0J9YXS1 232 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 NPHS1O60500 1241 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 PPP1R11O60927 126 aaPredicted RBP7.83□□□□□ -1.16
TTR-203ENST00000541025 ATF2P15336 505 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 LIMS1P48059 325 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 GNL2Q13823 731 aaKnown RBP7.83□□□□□ -1.16
TTR-203ENST00000541025 NCAPHQ15003 741 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 ATG9AQ7Z3C6 839 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 VPS37DQ86XT2 251 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 TP53I13Q8NBR0 393 aaPredicted RBP7.83□□□□□ -1.16
TTR-203ENST00000541025 CXorf38Q8TB03 319 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 PEX11GQ96HA9 241 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 MXD3Q9BW11 206 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 PA2G4Q9UQ80 394 aaKnown RBP7.83□□□□□ -1.16
TTR-203ENST00000541025 FAN1Q9Y2M0 1017 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 EMC9Q9Y3B6 208 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 ZNF609O15014 1411 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 ADAMTS20P59510 1910 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 AKAP11Q9UKA4 1901 aa7.83□□□□□ -1.16
TTR-203ENST00000541025 MYH2Q9UKX2 1941 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 PNMA6EA0A0J9YXQ4 647 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
TTR-203ENST00000541025 FFAR3O14843 346 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 GNAI3P08754 354 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 VIL1P09327 827 aaKnown RBP7.82□□□□□ -1.16
TTR-203ENST00000541025 HSPA6P17066 643 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 KCNJ4P48050 445 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 HTRA3P83110 453 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 FSTL1Q12841 308 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 TNIP1Q15025 636 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 C20orf194Q5TEA3 1177 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 C15orf52Q6ZUT6 534 aaKnown RBP7.82□□□□□ -1.16
TTR-203ENST00000541025 CPNE8Q86YQ8 564 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 ITPRIPQ8IWB1 547 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 FTSJ3Q8IY81 847 aaKnown RBP7.82□□□□□ -1.16
TTR-203ENST00000541025 FAM169BQ8N8A8 192 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 SMC1BQ8NDV3 1235 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 BVESQ8NE79 360 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 FNIP1Q8TF40 1166 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 ALG3Q92685 438 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 COPS5Q92905 334 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 MTA3Q9BTC8 594 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 COA1Q9GZY4 146 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 SIL1Q9H173 461 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.82□□□□□ -1.16
TTR-203ENST00000541025 CNOT7Q9UIV1 285 aaKnown RBP7.82□□□□□ -1.16
TTR-203ENST00000541025 RWDD3Q9Y3V2 267 aa7.82□□□□□ -1.16
TTR-203ENST00000541025 PCNTO95613 3336 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms