RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 GLRA2P23416 452 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 GATMP50440 423 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 KRT79Q5XKE5 535 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 RNF149Q8NC42 400 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 GAS2L1Q99501 681 aaPredicted RBP18.79■□□□□ 0.6
CD9-209ENST00000540891 INO80BQ9C086 356 aaPredicted RBP18.79■□□□□ 0.6
CD9-209ENST00000540891 MTUS1Q9ULD2 1270 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 CLIC4Q9Y696 253 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 STAG3L1P0CL83 205 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 IBSPP21815 317 aaPredicted RBP18.78■□□□□ 0.6
CD9-209ENST00000540891 SFPQP23246 707 aaKnown RBP eCLIP18.78■□□□□ 0.6
CD9-209ENST00000540891 GRIN1Q05586 938 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 CAPSQ13938 189 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 MXD4Q14582 209 aaPredicted RBP18.78■□□□□ 0.6
CD9-209ENST00000540891 PTPAQ15257 358 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 PADI6Q6TGC4 694 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 MAEAQ7L5Y9 396 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 KCNK18Q7Z418 384 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 POLR3FQ9H1D9 316 aaPredicted RBP18.78■□□□□ 0.6
CD9-209ENST00000540891 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
CD9-209ENST00000540891 EYSQ5T1H1 3165 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 COL4A4P53420 1690 aaPredicted RBP18.77■□□□□ 0.6
CD9-209ENST00000540891 ARHGEF35A5YM69 484 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 E9PMD0 336 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 BMP15O95972 392 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 ZSCAN20P17040 1043 aaPredicted RBP18.77■□□□□ 0.6
CD9-209ENST00000540891 CYP11B2P19099 503 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 PTENP60484 403 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 GRB10Q13322 594 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 HYIQ5T013 277 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 SRGAP1Q7Z6B7 1085 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 IFNLR1Q8IU57 520 aaPredicted RBP18.77■□□□□ 0.6
CD9-209ENST00000540891 ELAC1Q9H777 363 aaKnown RBP18.77■□□□□ 0.6
CD9-209ENST00000540891 CHST12Q9NRB3 414 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 RNF19AQ9NV58 838 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 TMEM161AQ9NX61 479 aa18.77■□□□□ 0.6
CD9-209ENST00000540891 POU5F1BQ06416 359 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 BTG3Q14201 252 aaPredicted RBP18.76■□□□□ 0.59
CD9-209ENST00000540891 FAM102BQ5T8I3 360 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 CATSPER4Q7RTX7 472 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 ECHDC2Q86YB7 292 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 CMTR2Q8IYT2 770 aaKnown RBP18.76■□□□□ 0.59
CD9-209ENST00000540891 FIBCD1Q8N539 461 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 MCPH1Q8NEM0 835 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 MAFAQ8NHW3 353 aaPredicted RBP18.76■□□□□ 0.59
CD9-209ENST00000540891 GDPD5Q8WTR4 605 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 AGPAT5Q9NUQ2 364 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 LRFN2Q9ULH4 789 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 PCDHB7Q9Y5E2 793 aa18.76■□□□□ 0.59
CD9-209ENST00000540891 MYO9BQ13459 2157 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 A0A0U1RQF3 1178 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 EYA4O95677 639 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 FGFR1P11362 822 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 POU3F3P20264 500 aaPredicted RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 IGFBP4P22692 258 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 PHKA2P46019 1235 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 TFDP1Q14186 410 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 PAN2Q504Q3 1202 aaKnown RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 ZNF598Q86UK7 904 aaKnown RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 TMEM192Q8IY95 271 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 SPRYD3Q8NCJ5 442 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 BSNDQ8WZ55 320 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 CLP1Q92989 425 aaKnown RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 TRAIPQ9BWF2 469 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 NFKBIZQ9BYH8 718 aa18.75■□□□□ 0.59
CD9-209ENST00000540891 ZSCAN16Q9H4T2 348 aaPredicted RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 PIN4Q9Y237 131 aaKnown RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
CD9-209ENST00000540891 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
CD9-209ENST00000540891 HOXA11P31270 313 aaPredicted RBP18.74■□□□□ 0.59
CD9-209ENST00000540891 MBTD1Q05BQ5 628 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 AMHR2Q16671 573 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 TMEM119Q4V9L6 283 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 FBXO22Q8NEZ5 403 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 LRRC15Q8TF66 581 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 AK8Q96MA6 479 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 SAMD11Q96NU1 681 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 POLD4Q9HCU8 107 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 DACT1Q9NYF0 836 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 MTCH2Q9Y6C9 303 aa18.74■□□□□ 0.59
CD9-209ENST00000540891 C5orf67F2Z3F1 127 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 MARCKSP29966 332 aaPredicted RBP18.73■□□□□ 0.59
CD9-209ENST00000540891 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
CD9-209ENST00000540891 PKP1Q13835 747 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 ZRSR1Q15695 479 aaKnown RBP18.73■□□□□ 0.59
CD9-209ENST00000540891 UBXN11Q5T124 520 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 CABP7Q86V35 215 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 PLIN2Q99541 437 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 RUSC1Q9BVN2 902 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
CD9-209ENST00000540891 HCSTQ9UBK5 93 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 FBXO2Q9UK22 296 aaPredicted RBP18.73■□□□□ 0.59
CD9-209ENST00000540891 RALGAPA2Q2PPJ7 1873 aa18.73■□□□□ 0.59
CD9-209ENST00000540891 FNDC1Q4ZHG4 1894 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms