RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RASEFQ8IZ41 740 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 LRRC71Q8N4P6 559 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 C12orf76Q8N812 135 aaPredicted RBP8.27□□□□□ -1.09
YBX3-209ENST00000540747 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 RSPH1Q8WYR4 309 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 MAP7D2Q96T17 732 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 ZNF577Q9BSK1 485 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 MRPL9Q9BYD2 267 aaKnown RBP8.27□□□□□ -1.09
YBX3-209ENST00000540747 TSHZ2Q9NRE2 1034 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 GABBR1Q9UBS5 961 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 WDR81Q562E7 1941 aa8.27□□□□□ -1.09
YBX3-209ENST00000540747 MYH9P35579 1960 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 WDR64B1ANS9 1081 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 NT5C1B-RDH14C9J2C7 533 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 LILRB3O75022 631 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 PAPLNO95428 1278 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ZSCAN20P17040 1043 aaPredicted RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 FGFR4P22455 802 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ZNF76P36508 570 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 PHKA2P46019 1235 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 PRKCEQ02156 737 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ADCK5Q3MIX3 580 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 RARS2Q5T160 578 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 ERICH6BQ5W0A0 696 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 MCTP2Q6DN12 878 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 DHX32Q7L7V1 743 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 FRMD5Q7Z6J6 570 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ZBTB33Q86T24 672 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 DDX53Q86TM3 631 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 CKAP2LQ8IYA6 745 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ABI1Q8IZP0 508 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 VPS52Q8N1B4 723 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 REXO1Q8N1G1 1221 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 TDRD5Q8NAT2 981 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 AUTS2Q8WXX7 1259 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 IGSF21Q96ID5 467 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 ZNF668Q96K58 619 aaPredicted RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 TCEANC2Q96MN5 208 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 CHST12Q9NRB3 414 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 LIMD1Q9UGP4 676 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 AKT3Q9Y243 479 aa8.26□□□□□ -1.09
YBX3-209ENST00000540747 TPRP12270 2363 aaKnown RBP8.26□□□□□ -1.09
YBX3-209ENST00000540747 KLF18A0A0U1RQI7 1052 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.25□□□□□ -1.09
YBX3-209ENST00000540747 GOLGA8AA7E2F4 631 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 MEIS3P2A8K0S8 358 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 GOLGA8BA8MQT2 603 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 MSH4O15457 936 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 ZNF623O75123 536 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 CSDE1O75534 798 aaKnown RBP8.25□□□□□ -1.09
YBX3-209ENST00000540747 CXCL14O95715 111 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 EFEMP2O95967 443 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 GALTP07902 379 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 AOC1P19801 751 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 TMOD1P28289 359 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
YBX3-209ENST00000540747 ALDH7A1P49419 539 aaKnown RBP8.25□□□□□ -1.09
YBX3-209ENST00000540747 METAP2P50579 478 aaKnown RBP eCLIP8.25□□□□□ -1.09
YBX3-209ENST00000540747 PRR16Q569H4 304 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 SYNE3Q6ZMZ3 975 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 GPR149Q86SP6 731 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 CCDC105Q8IYK2 499 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 PLCD3Q8N3E9 789 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 RNF169Q8NCN4 708 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 KCNB2Q92953 911 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 RIT2Q99578 217 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 NIFKQ9BYG3 293 aaKnown RBP8.25□□□□□ -1.09
YBX3-209ENST00000540747 RHOBTB2Q9BYZ6 727 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 NRDE2Q9H7Z3 1164 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 ANO2Q9NQ90 1003 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 CYP26B1Q9NR63 512 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 DISC1Q9NRI5 854 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 TBC1D13Q9NVG8 400 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 DACT1Q9NYF0 836 aa8.25□□□□□ -1.09
YBX3-209ENST00000540747 CARNS1A5YM72 827 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 PRPF3O43395 683 aaKnown RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 PI15O43692 258 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 N4BP1O75113 896 aaKnown RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 ZC3H11AO75152 810 aaKnown RBP eCLIP8.24□□□□□ -1.09
YBX3-209ENST00000540747 OFD1O75665 1012 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 PSMD10O75832 226 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 SLC11A1P49279 550 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 CLCN4P51793 760 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 GIT2Q14161 759 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 NTRK3Q16288 839 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 ATAT1Q5SQI0 421 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 TMC5Q6UXY8 1006 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 ERMP1Q7Z2K6 904 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 TRMT1LQ7Z2T5 733 aaKnown RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 RNF168Q8IYW5 571 aaPredicted RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 FBXL16Q8N461 479 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 CMASQ8NFW8 434 aaPredicted RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 RDM1Q8NG50 284 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 LPPQ93052 612 aa8.24□□□□□ -1.09
YBX3-209ENST00000540747 NKD2Q969F2 451 aaPredicted RBP8.24□□□□□ -1.09
YBX3-209ENST00000540747 MBOAT7Q96N66 472 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms