RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 AXLP30530 894 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 PHKA2P46019 1235 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 TFF2Q03403 129 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 RABEP1Q15276 862 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 UGCGQ16739 394 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 PAN2Q504Q3 1202 aaKnown RBP11.6□□□□□ -0.55
CDCA3-208ENST00000540683 KRT40Q6A162 431 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 TWF2Q6IBS0 349 aaKnown RBP11.6□□□□□ -0.55
CDCA3-208ENST00000540683 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 CATSPER4Q7RTX7 472 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 RHPN2Q8IUC4 686 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 NECAB1Q8N987 351 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 MICAL1Q8TDZ2 1067 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 TMEM40Q8WWA1 233 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 ZBTB10Q96DT7 871 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 ZNF558Q96NG5 402 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 NGRNQ9NPE2 291 aaKnown RBP11.6□□□□□ -0.55
CDCA3-208ENST00000540683 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 ANKEF1Q9NU02 776 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 VCANP13611 3396 aa11.6□□□□□ -0.55
CDCA3-208ENST00000540683 ERLIN2O94905 339 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
CDCA3-208ENST00000540683 POU5F1BQ06416 359 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 GIT2Q14161 759 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 DSC3Q14574 896 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 COL19A1Q14993 1142 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 XKR9Q5GH70 373 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 TCEAL5Q5H9L2 206 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 PTCRAQ6ISU1 281 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-208ENST00000540683 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 ANO5Q75V66 913 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 ECHDC2Q86YB7 292 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 PPP1R16BQ96T49 567 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 MTRQ99707 1265 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
CDCA3-208ENST00000540683 TTC12Q9H892 705 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-208ENST00000540683 TLR9Q9NR96 1032 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 CLDND1Q9NY35 253 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 CNTNAP2Q9UHC6 1331 aa11.59□□□□□ -0.55
CDCA3-208ENST00000540683 BTBD18B2RXH4 712 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 LAD1O00515 517 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 GRM6O15303 877 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 EDIL3O43854 480 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 ZNF623O75123 536 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 ALADP13716 330 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 FDPSP14324 419 aaKnown RBP11.58□□□□□ -0.56
CDCA3-208ENST00000540683 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
CDCA3-208ENST00000540683 KCNQ1P51787 676 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 PLCB3Q01970 1234 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 NR5A1Q13285 461 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 EMC2Q15006 297 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 MCPH1Q8NEM0 835 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 HAS1Q92839 578 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 NLRP4Q96MN2 994 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 TLE6Q9H808 572 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 CDHR5Q9HBB8 845 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 TUFT1Q9NNX1 390 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 TYW1Q9NV66 732 aaKnown RBP11.58□□□□□ -0.56
CDCA3-208ENST00000540683 SPG21Q9NZD8 308 aa11.58□□□□□ -0.56
CDCA3-208ENST00000540683 PIN4Q9Y237 131 aaKnown RBP11.58□□□□□ -0.56
CDCA3-208ENST00000540683 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 A0A087WZ62 844 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 GRXCR2A6NFK2 248 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 EML1O00423 815 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 MGEA5O60502 916 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 NR1I2O75469 434 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 FGF18O76093 207 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 ITGB1P05556 798 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 TXKP42681 527 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 NDUFV1P49821 464 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 ELMSAN1Q6PJG2 1045 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 APBB1IPQ7Z5R6 666 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 SPRED2Q7Z698 418 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 EFHBQ8N7U6 833 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 COLGALT1Q8NBJ5 622 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 RNF169Q8NCN4 708 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 FBXO18Q8NFZ0 1043 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 SPPL3Q8TCT6 385 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 POF1BQ8WVV4 589 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 GJA10Q969M2 543 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 NACC1Q96RE7 527 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 HSD17B14Q9BPX1 270 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 EIF2AK1Q9BQI3 630 aaKnown RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 FDXACB1Q9BRP7 624 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-208ENST00000540683 NFKBIZQ9BYH8 718 aa11.57□□□□□ -0.56
CDCA3-208ENST00000540683 ALG13Q9NP73 1137 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms