RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DNM3Q9UQ16 869 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 COL4A3BPQ9Y5P4 624 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 SQORQ9Y6N5 450 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 RALGAPA2Q2PPJ7 1873 aa7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 FNDC1Q4ZHG4 1894 aaPredicted RBP7.76□□□□□ -1.17
LPCAT3-209ENST00000540060 TRIOBPQ9H2D6 2365 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SZT2Q5T011 3432 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A1W2PPC1 479 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CYP11B2P19099 503 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 TXLNAP40222 546 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 ME1P48163 572 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CRYBB1P53674 252 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SLC12A3P55017 1021 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 NLRP11P59045 1033 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CAPSQ13938 189 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SHHQ15465 462 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 NAALADL2Q58DX5 795 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 RESP18Q5W5W9 173 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 ZNF365Q70YC5 407 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 ZNF410Q86VK4 478 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 RHPN2Q8IUC4 686 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SYT2Q8N9I0 419 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 USP38Q8NB14 1042 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 RASSF8Q8NHQ8 419 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 ASAP3Q8TDY4 903 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 PRPF31Q8WWY3 499 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 PSPC1Q8WXF1 523 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 LARP4BQ92615 738 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 RAD54LQ92698 747 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 ZNF668Q96K58 619 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 IPO9Q96P70 1041 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 RUSC1Q9BVN2 902 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 IFIH1Q9BYX4 1025 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SCAND2PQ9GZW5 306 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 POLR3FQ9H1D9 316 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 AGO3Q9H9G7 860 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 IFT122Q9HBG6 1241 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CHMP5Q9NZZ3 219 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 SUCLA2Q9P2R7 463 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CCDC39Q9UFE4 941 aa7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 COL4A4P53420 1690 aaPredicted RBP7.75□□□□□ -1.17
LPCAT3-209ENST00000540060 CDH23Q9H251 3354 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 A0A087WZ62 844 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 BAIAP3O94812 1187 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 FGBP02675 491 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 PLA2G4BP0C869 781 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 DARSP14868 501 aaKnown RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 GLRA2P23416 452 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 CD52P31358 61 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 ARL2P36404 184 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 CDC42EP1Q00587 391 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 LAMTOR4Q0VGL1 99 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 MAPK7Q13164 816 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 PAK2Q13177 524 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 MXD4Q14582 209 aaPredicted RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 E2F4Q16254 413 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 RINT1Q6NUQ1 792 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 C1orf186Q6ZWK4 172 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 OTOP2Q7RTS6 562 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM228AQ86W67 206 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 DAW1Q8N136 415 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 DBF4BQ8NFT6 615 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 NLRP7Q8WX94 980 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 BSNDQ8WZ55 320 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 HERVK_113Q902F9 699 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 SEPT8Q92599 483 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 APBB2Q92870 758 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 RNPC3Q96LT9 517 aaKnown RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 NLRP4Q96MN2 994 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 SCLT1Q96NL6 688 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 ERVK-5Q9HDB9 667 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 KCND2Q9NZV8 630 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 CXXC1Q9P0U4 656 aaPredicted RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 PADI3Q9ULW8 664 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 GINS2Q9Y248 185 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 NOC2LQ9Y3T9 749 aaKnown RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 REV3LO60673 3130 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 PDCD11Q14690 1871 aaKnown RBP7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 TTC3P53804 2025 aa7.74□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM237AA0A1B0GTK4 181 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ASAP2O43150 1006 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 HIP1RO75146 1068 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 RPS6KA5O75582 802 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ACTN1P12814 892 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 PRKCSHP14314 528 aaPredicted RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 PFKFB1P16118 471 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 EIF4BP23588 611 aaKnown RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 STAT6P42226 847 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 WDR5P61964 334 aaKnown RBP7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 POU5F1BQ06416 359 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 MCM6Q14566 821 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 ARSHQ5FYA8 562 aa7.73□□□□□ -1.17
LPCAT3-209ENST00000540060 FAM102BQ5T8I3 360 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms