RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
DDB1-215ENST00000539712 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
DDB1-215ENST00000539712 PPME1Q9Y570 386 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 NEMFO60524 1076 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 LYPLA2O95372 231 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 ZSCAN20P17040 1043 aaPredicted RBP18.76■□□□□ 0.59
DDB1-215ENST00000539712 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDB1-215ENST00000539712 TPH2Q8IWU9 490 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 FBXO18Q8NFZ0 1043 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 C8orf76Q96K31 380 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 SCLT1Q96NL6 688 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
DDB1-215ENST00000539712 TRAIPQ9BWF2 469 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 TMEM117Q9H0C3 514 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 CHST12Q9NRB3 414 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 SH2B1Q9NRF2 756 aaPredicted RBP18.76■□□□□ 0.59
DDB1-215ENST00000539712 TRIOO75962 3097 aa18.76■□□□□ 0.59
DDB1-215ENST00000539712 H3BQ06 376 aaPredicted RBP18.75■□□□□ 0.59
DDB1-215ENST00000539712 RFC5P40937 340 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 TXKP42681 527 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 DLX2Q07687 328 aaPredicted RBP18.75■□□□□ 0.59
DDB1-215ENST00000539712 ADGRD2Q7Z7M1 963 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 POF1BQ8WVV4 589 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 SLC7A3Q8WY07 619 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 NLRP4Q96MN2 994 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 MINDY3Q9H8M7 445 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 CD320Q9NPF0 282 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 XPNPEP1Q9NQW7 623 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 PCDHGC5Q9Y5F6 944 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 PLXNA4Q9HCM2 1894 aa18.75■□□□□ 0.59
DDB1-215ENST00000539712 GRXCR2A6NFK2 248 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 CSPG5O95196 566 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 EOMESO95936 686 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 SPATA31C1P0DKV0 1188 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 ATP2B1P20020 1258 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 POLGP54098 1239 aaPredicted RBP18.74■□□□□ 0.59
DDB1-215ENST00000539712 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 EMC2Q15006 297 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 XKR9Q5GH70 373 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 OTUD6AQ7L8S5 288 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 COLGALT1Q8NBJ5 622 aa18.74■□□□□ 0.59
DDB1-215ENST00000539712 FOXP1Q9H334 677 aaPredicted RBP18.74■□□□□ 0.59
DDB1-215ENST00000539712 BMP2KQ9NSY1 1161 aaPredicted RBP18.74■□□□□ 0.59
DDB1-215ENST00000539712 A0A087WWV3 80 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 POTEMA6NI47 508 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 LINC01565O15544 149 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 HOXA2O43364 376 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 FGF18O76093 207 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 IL9P15248 144 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 HOXA11P31270 313 aaPredicted RBP18.73■□□□□ 0.59
DDB1-215ENST00000539712 MCM7P33993 719 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 PHKA2P46019 1235 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 HMGN5P82970 282 aaKnown RBP18.73■□□□□ 0.59
DDB1-215ENST00000539712 SAFBQ15424 915 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDB1-215ENST00000539712 PTCRAQ6ISU1 281 aaPredicted RBP18.73■□□□□ 0.59
DDB1-215ENST00000539712 FERMT3Q86UX7 667 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 PSPC1Q8WXF1 523 aaKnown RBP18.73■□□□□ 0.59
DDB1-215ENST00000539712 CLDND1Q9NY35 253 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 PCDHB12Q9Y5F1 795 aa18.73■□□□□ 0.59
DDB1-215ENST00000539712 ARID2Q68CP9 1835 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 MEIS3P2A8K0S8 358 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 NCK2O43639 380 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 ZNF623O75123 536 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 SRGAP2CP0DJJ0 459 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 SFPQP23246 707 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDB1-215ENST00000539712 ERVFC1P60507 584 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 ADAM15Q13444 863 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 C4orf32Q8N8J7 132 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 RNF169Q8NCN4 708 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 KHSRPQ92945 711 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDB1-215ENST00000539712 INO80BQ9C086 356 aaPredicted RBP18.72■□□□□ 0.59
DDB1-215ENST00000539712 AAASQ9NRG9 546 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 ANKEF1Q9NU02 776 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
DDB1-215ENST00000539712 GAS2O43903 313 aaKnown RBP18.71■□□□□ 0.59
DDB1-215ENST00000539712 TBX10O75333 385 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 CD2BP2O95400 341 aaKnown RBP18.71■□□□□ 0.59
DDB1-215ENST00000539712 LAG3P18627 525 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 PBX3P40426 434 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 RARRES1P49788 294 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 UBE3AQ05086 875 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
DDB1-215ENST00000539712 RABEP1Q15276 862 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 ZNF174Q15697 407 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 SPOUT1Q5T280 376 aaKnown RBP18.71■□□□□ 0.59
DDB1-215ENST00000539712 KCNT2Q6UVM3 1135 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 CATSPER4Q7RTX7 472 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 NOSTRINQ8IVI9 506 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 FAM178BQ8IXR5 827 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 HELQQ8TDG4 1101 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 LPPQ93052 612 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 IGFLR1Q9H665 355 aa18.71■□□□□ 0.59
DDB1-215ENST00000539712 PIN4Q9Y237 131 aaKnown RBP18.71■□□□□ 0.59
DDB1-215ENST00000539712 FSCN2O14926 492 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms