RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 HOXA7P31268 230 aaPredicted RBP21.99■■□□□ 1.11
TMEM260-203ENST00000539559 IFNAR2P48551 515 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 MARCKSL1P49006 195 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 ARHGAP4P98171 946 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 DRP2Q13474 957 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 SYT2Q8N9I0 419 aaPredicted RBP21.99■■□□□ 1.11
TMEM260-203ENST00000539559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.99■■□□□ 1.11
TMEM260-203ENST00000539559 DNAJC12Q9UKB3 198 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 DAAM1Q9Y4D1 1078 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 ECM2O94769 699 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-203ENST00000539559 SHMT1P34896 483 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 CCDC38Q502W7 563 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 ERMARDQ5T6L9 678 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 ETNPPLQ8TBG4 499 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 SGSM3Q96HU1 749 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 TXLNGYQ9BZA5 131 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 ZDHHC18Q9NUE0 388 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 TYW1Q9NV66 732 aaKnown RBP21.98■■□□□ 1.11
TMEM260-203ENST00000539559 SERPINB13Q9UIV8 391 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 SLC29A2Q14542 456 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 NBPF9Q3BBW0 867 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 PREPLQ4J6C6 727 aaPredicted RBP21.98■■□□□ 1.11
TMEM260-203ENST00000539559 CBWD6Q4V339 395 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 CBWD3Q5JTY5 395 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 CBWD5Q5RIA9 395 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 RDH13Q8NBN7 331 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 GIMAP7Q8NHV1 300 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 SLC30A5Q8TAD4 765 aa21.98■■□□□ 1.11
TMEM260-203ENST00000539559 MEIS2O14770 477 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 PMS2P54278 862 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 PTENP60484 403 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 PLS1Q14651 629 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 TBC1D31Q96DN5 1066 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 ERP44Q9BS26 406 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 FAM129AQ9BZQ8 928 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 CCDC113Q9H0I3 377 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 ADAM7Q9H2U9 754 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 SEMA4AQ9H3S1 761 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 A1CFQ9NQ94 594 aaKnown RBP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 GAKO14976 1311 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 A0A0A6YYK5 440 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 EML1O00423 815 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 FERP16591 822 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 HOXA13P31271 388 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 SOX5P35711 763 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 DUPD1Q68J44 220 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 LRRC34Q8IZ02 419 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 EPS8L3Q8TE67 593 aaKnown RBP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 CTNNBL1Q8WYA6 563 aaPredicted RBP21.97■■□□□ 1.11
TMEM260-203ENST00000539559 KRT35Q92764 455 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 MCM8Q9UJA3 840 aa21.97■■□□□ 1.11
TMEM260-203ENST00000539559 TBCAO75347 108 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 FGFR4P22455 802 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 CYP2J2P51589 502 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 KLRC3Q07444 240 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 CTTNQ14247 550 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 ZDHHC24Q6UX98 284 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 JAMLQ86YT9 394 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 FAM186BQ8IYM0 893 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 KIRREL3Q8IZU9 778 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 RFFLQ8WZ73 363 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 SUGT1Q9Y2Z0 365 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 PPATQ06203 517 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 FAM133BQ5BKY9 247 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 HIBCHQ6NVY1 386 aaPredicted RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 CPNE8Q86YQ8 564 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 ZFPM1Q8IX07 1006 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 N4BP2L2Q92802 583 aaPredicted RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 PRMT1Q99873 361 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 ELAC2Q9BQ52 826 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 RAB17Q9H0T7 212 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 ODF2LQ9ULJ1 636 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 MYO3BQ8WXR4 1341 aa21.96■■□□□ 1.11
TMEM260-203ENST00000539559 TNS1Q9HBL0 1735 aaKnown RBP21.96■■□□□ 1.11
TMEM260-203ENST00000539559 RPA1P27694 616 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 CACNB3P54284 484 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 PPP1R7Q15435 360 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 ZNF317Q96PQ6 595 aaPredicted RBP21.95■■□□□ 1.1
TMEM260-203ENST00000539559 GPR88Q9GZN0 384 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 PLIN4Q96Q06 1357 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 CHMP2AO43633 222 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 RPL13P26373 211 aaKnown RBP21.95■■□□□ 1.1
TMEM260-203ENST00000539559 DENND2CQ68D51 928 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 ZNF746Q6NUN9 644 aaPredicted RBP21.95■■□□□ 1.1
TMEM260-203ENST00000539559 ZDHHC14Q8IZN3 488 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 C3orf20Q8ND61 904 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 SLC20A1Q8WUM9 679 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 LENG9Q96B70 501 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 BAIAP2L1Q9UHR4 511 aa21.95■■□□□ 1.1
TMEM260-203ENST00000539559 G3V3G9 751 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 NEDD9Q14511 834 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 KIAA1755Q5JYT7 1200 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 GPATCH4Q5T3I0 446 aaKnown RBP21.94■■□□□ 1.1
TMEM260-203ENST00000539559 DCAF8Q5TAQ9 597 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 SLFN12Q8IYM2 578 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 MYCT1Q8N699 235 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 CCDC197Q8NCU1 140 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 NEK9Q8TD19 979 aa21.94■■□□□ 1.1
TMEM260-203ENST00000539559 ATXN2LQ8WWM7 1075 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms