RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 C11orf84Q9BUA3 381 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-210ENST00000539303 EPB41L4BQ9H329 900 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 ARNT2Q9HBZ2 717 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 DCP1AQ9NPI6 582 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-210ENST00000539303 FTSJ1Q9UET6 329 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 SAP30BPQ9UHR5 308 aaKnown RBP4.08□□□□□ -1.76
SNHG1-210ENST00000539303 DNAI1Q9UI46 699 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 CDC42EP3Q9UKI2 254 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 PCDHB6Q9Y5E3 794 aa4.08□□□□□ -1.76
SNHG1-210ENST00000539303 GOLGA6CA6NDK9 693 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 GOLGA6BA6NDN3 693 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 CCDC154A6NI56 674 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 BIN1O00499 593 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 POU2F2P09086 479 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 GOLGA6DP0CG33 693 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 STAT5BP51692 787 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 SLC5A3P53794 718 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 MLLT6P55198 1093 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-210ENST00000539303 BCAR1P56945 870 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 PPP3CAQ08209 521 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 MGAT5Q09328 741 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 IL10RAQ13651 578 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 GTF2H3Q13889 308 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 WDR72Q3MJ13 1102 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 SYCP2LQ5T4T6 812 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 OLFML2BQ68BL8 750 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 TMEM132EQ6IEE7 984 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 TMEFF1Q8IYR6 380 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 CDYL2Q8N8U2 506 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 SLC35G2Q8TBE7 412 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 ZCCHC14Q8WYQ9 949 aaKnown RBP4.07□□□□□ -1.76
SNHG1-210ENST00000539303 KAT5Q92993 513 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 TMEM209Q96SK2 561 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 HAPLN2Q9GZV7 340 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 CSRNP2Q9H175 543 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 NGRNQ9NPE2 291 aaKnown RBP4.07□□□□□ -1.76
SNHG1-210ENST00000539303 NMRK2Q9NPI5 230 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 GOLGA6AQ9NYA3 693 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 KCMF1Q9P0J7 381 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 SCOCQ9UIL1 159 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 INTUQ9ULD6 942 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 DNM3Q9UQ16 869 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 FAM50BQ9Y247 325 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 IPPQ9Y573 584 aa4.07□□□□□ -1.76
SNHG1-210ENST00000539303 FRMPD2Q68DX3 1309 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 TEX51A0A1B0GUA7 166 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 LRRC10BA6NIK2 292 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 HTRA2O43464 458 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 CAND2O75155 1236 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 TMEM127O75204 238 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 OFD1O75665 1012 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 SEC24DO94855 1032 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 KNG1P01042 644 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 MTHFD2P13995 350 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 HNRNPLP14866 589 aaKnown RBP eCLIP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 HSPA6P17066 643 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 PFKLP17858 780 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 PDCP20941 246 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 RHBDL3P58872 404 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 CD69Q07108 199 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 NFATC3Q12968 1075 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 MALLQ13021 153 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 GBX1Q14549 363 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 LLGL1Q15334 1064 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 TARBP2Q15633 366 aaKnown RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 GRAMD4Q6IC98 578 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 CYB5RLQ6IPT4 315 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 OTOP2Q7RTS6 562 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 OVCH2Q7RTZ1 564 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 GLB1L3Q8NCI6 653 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 DIS3LQ8TF46 1054 aaKnown RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 SSH1Q8WYL5 1049 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 PMM1Q92871 262 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 HPS3Q969F9 1004 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 SLC39A13Q96H72 371 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 DYDC2Q96IM9 177 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 CLIC6Q96NY7 704 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 EPB41L4AQ9HCS5 686 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-210ENST00000539303 SYNPO2Q9UMS6 1093 aa4.06□□□□□ -1.76
SNHG1-210ENST00000539303 PEX10O60683 326 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 CTNND1O60716 968 aaKnown RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 ALDH2P05091 517 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 KRT18P05783 430 aaKnown RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 AKAP5P24588 427 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 MCAMP43121 646 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 KCNQ1P51787 676 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 USP14P54578 494 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 SEPT2Q15019 361 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 ATAT1Q5SQI0 421 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 TMEM200BQ69YZ2 307 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 CCSAPQ6IQ19 270 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 PPP4R4Q6NUP7 873 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 ABHD15Q6UXT9 468 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 USP45Q70EL2 814 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 BMP8AQ7Z5Y6 402 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 CERS3Q8IU89 383 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 CCAR1Q8IX12 1150 aaKnown RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 ADGRG2Q8IZP9 1017 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 Q8N3U1 123 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms