RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ALKBH5Q6P6C2 394 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 HEATR3Q7Z4Q2 680 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TRIM59Q8IWR1 403 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 PGBD3Q8N328 593 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 FBF1Q8TES7 1133 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 PARD3BQ8TEW8 1205 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ATP8B4Q8TF62 1192 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 DYDC1Q8WWB3 177 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ZBTB10Q96DT7 871 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 HES6Q96HZ4 224 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 TSC22D3Q99576 134 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 MMTAG2Q9BU76 263 aaKnown RBP9.75□□□□□ -0.85
SNHG1-209ENST00000538654 YIPF3Q9GZM5 350 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 GANQ9H2C0 597 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 AZI2Q9H6S1 392 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 RXFP1Q9HBX9 757 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ZDHHC18Q9NUE0 388 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 ANKIB1Q9P2G1 1089 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 IP6K2Q9UHH9 426 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 NAGPAQ9UK23 515 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 AMFRQ9UKV5 643 aa9.75□□□□□ -0.85
SNHG1-209ENST00000538654 LRRD1A4D1F6 860 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 USP17L12C9JPN9 530 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 USP17L21D6R901 530 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 EVI5O60447 810 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 H2AFZP0C0S5 128 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 GNA11P29992 359 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ATP5DP30049 168 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 PTK2Q05397 1052 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 GRM4Q14833 912 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 LETM2Q2VYF4 491 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 CCDC152Q4G0S7 254 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 H2AFVQ71UI9 128 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ERICH1Q86X53 443 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 BLOC1S4Q9NUP1 217 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 CTNNAL1Q9UBT7 734 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ABCF2Q9UG63 623 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ATP5HO75947 161 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 GJB6O95452 261 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 SHBGP04278 402 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 KRT16P08779 473 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 LINGO3P0C6S8 592 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ATP4AP20648 1035 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 PRKCIP41743 596 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 PAPOLAP51003 745 aaKnown RBP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ROR2Q01974 943 aaKnown RBP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 GRB10Q13322 594 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 CNGA2Q16280 664 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 PPP4R4Q6NUP7 873 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ASRGL1Q7L266 308 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 DYMQ7RTS9 669 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 NT5DC3Q86UY8 548 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 TBC1D16Q8TBP0 767 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 RAD54LQ92698 747 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 RUNDC3BQ96NL0 473 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 CELF4Q9BZC1 486 aaKnown RBP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ROPN1BQ9BZX4 212 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 EPB41L4BQ9H329 900 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ROPN1Q9HAT0 212 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-209ENST00000538654 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 ADAM22Q9P0K1 906 aa9.74□□□□□ -0.85
SNHG1-209ENST00000538654 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CACNA1SQ13698 1873 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 NMT2O60551 498 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 GFPT2O94808 682 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 FGGP02679 453 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 HSPA6P17066 643 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 FXR2P51116 673 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 KLRC3Q07444 240 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CCDC15Q0P6D6 951 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 LBRQ14739 615 aaKnown RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 HLFQ16534 295 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 MFSD5Q6N075 450 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TOM1L2Q6ZVM7 507 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 IRF2BP2Q7Z5L9 587 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 PNMA1Q8ND90 353 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TXLNGQ9NUQ3 528 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 ARPP21Q9UBL0 812 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 LRRC42Q9Y546 428 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 KIF13AQ9H1H9 1805 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 SMAPO00193 183 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 LGR5O75473 907 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CCNB1P14635 433 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 NAT1P18440 290 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CNGA1P29973 690 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 IGHMBP2P38935 993 aaKnown RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-209ENST00000538654 RPS6KA3P51812 740 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 PDIA5Q14554 519 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 TNFAIP8L3Q5GJ75 292 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 FAM47AQ5JRC9 791 aa9.73□□□□□ -0.85
SNHG1-209ENST00000538654 KIAA1755Q5JYT7 1200 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms