RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GOLGA6L9A6NEM1 432 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 BTBD19C9JJ37 291 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 SRGAP2O75044 1071 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 CYLC1P35663 651 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-205ENST00000538545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTN1-205ENST00000538545 KMT5AQ9NQR1 393 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 ANKEF1Q9NU02 776 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 PUF60Q9UHX1 559 aaKnown RBP15.44■□□□□ 0.06
ACTN1-205ENST00000538545 PDHXO00330 501 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 ADRB2P07550 413 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 TCF7P36402 384 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-205ENST00000538545 GCLMP48507 274 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 KCTD2Q14681 263 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 KLHDC7AQ5VTJ3 777 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 SFMBT2Q5VUG0 894 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 MIS18BP1Q6P0N0 1132 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 SLC39A4Q6P5W5 647 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 CCDC127Q96BQ5 260 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 POLR3FQ9H1D9 316 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-205ENST00000538545 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 FBXO40Q9UH90 709 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 ADAMTS1Q9UHI8 967 aa15.44■□□□□ 0.06
ACTN1-205ENST00000538545 ARID2Q68CP9 1835 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 HTTP42858 3142 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 EDNRBP24530 442 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 FMO5P49326 533 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 GTF2BQ00403 316 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 PPP3CAQ08209 521 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 DMP1Q13316 513 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-205ENST00000538545 OTUD6AQ7L8S5 288 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 PPP1R13LQ8WUF5 828 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 TRAPPC12Q8WVT3 735 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 CDHR1Q96JP9 859 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 PACSIN1Q9BY11 444 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 TOPORSQ9NS56 1045 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-205ENST00000538545 TBX20Q9UMR3 447 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 NFASCO94856 1347 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 CCL15-CCL14A0A0B4J2E2 113 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 CELF2O95319 508 aaKnown RBP15.43■□□□□ 0.06
ACTN1-205ENST00000538545 POLGP54098 1239 aaPredicted RBP15.43■□□□□ 0.06
ACTN1-205ENST00000538545 CCL15Q16663 113 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 STXBP4Q6ZWJ1 553 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 BRI3BPQ8WY22 251 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 MS4A4AQ96JQ5 239 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 ACCSQ96QU6 501 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 SPAG5Q96R06 1193 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 IFIH1Q9BYX4 1025 aaKnown RBP15.43■□□□□ 0.06
ACTN1-205ENST00000538545 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
ACTN1-205ENST00000538545 A0A087X0T9 212 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 EIF3CLB5ME19 914 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 SLC16A3O15427 465 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 GJB1P08034 283 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 FAM228BP0C875 321 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 OSBPP22059 807 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 CNGA1P29973 690 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 HNRNPH3P31942 346 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 NCKAP1LP55160 1127 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 BFSP1Q12934 665 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 IQCEQ6IPM2 695 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 FASTKD5Q7L8L6 764 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 EMSYQ7Z589 1322 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 PNMA8AQ86V59 439 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 ASAP3Q8TDY4 903 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 EIF3CQ99613 913 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 NMRK2Q9NPI5 230 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 PCDHA13Q9Y5I0 950 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 CAPN6Q9Y6Q1 641 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 IGSF9BQ9UPX0 1349 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 BUB1O43683 1085 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 PTPROQ16827 1216 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 ARHGAP44Q17R89 818 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 SEZ6Q53EL9 994 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 LMBRD2Q68DH5 695 aaPredicted RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 GBP6Q6ZN66 633 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 PSMB7Q99436 277 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 METTL14Q9HCE5 456 aaKnown RBP15.42■□□□□ 0.06
ACTN1-205ENST00000538545 PDLIM7Q9NR12 457 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 MRFAP1Q9Y605 127 aa15.42■□□□□ 0.06
ACTN1-205ENST00000538545 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
ACTN1-205ENST00000538545 MOCS3O95396 460 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 OATP04181 439 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 ATP1A1P05023 1023 aaKnown RBP15.41■□□□□ 0.06
ACTN1-205ENST00000538545 EDN1P05305 212 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 ICAM3P32942 547 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 PTK2Q05397 1052 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 EMC2Q15006 297 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 ASTE1Q2TB18 679 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-205ENST00000538545 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 ZBTB45Q96K62 511 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-205ENST00000538545 MAFBQ9Y5Q3 323 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-205ENST00000538545 SCN4AP35499 1836 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 GFPT2O94808 682 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 KLHL30Q0D2K2 578 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 SPA17Q15506 151 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 XKR3Q5GH77 459 aa15.41■□□□□ 0.06
ACTN1-205ENST00000538545 LRRC71Q8N4P6 559 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms