RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 KBTBD12Q3ZCT8 623 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 TTC38Q5R3I4 469 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 ZNF362Q5T0B9 420 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 SH3RF3Q8TEJ3 882 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 RAB3IPQ96QF0 476 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 IWS1Q96ST2 819 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 BRD8Q9H0E9 1235 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 A0A087WZG4 1122 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 E7ENQ6 273 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 CAPN9O14815 690 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 PSMA7O14818 248 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 TMCC1O94876 653 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 KLRC3Q07444 240 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 TMED1Q13445 227 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 LIN52Q52LA3 116 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 ACSBG2Q5FVE4 666 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 DENND2CQ68D51 928 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 AADACL2Q6P093 401 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 ZDHHC24Q6UX98 284 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 VSIG1Q86XK7 387 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 DZIP3Q86Y13 1208 aaKnown RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 GBP7Q8N8V2 638 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 DHTKD1Q96HY7 919 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 MPP4Q96JB8 637 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 CCDC85AQ96PX6 553 aaPredicted RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 TGS1Q96RS0 853 aaKnown RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 PABPC3Q9H361 631 aaKnown RBP11.5□□□□□ -0.57
RTN3-208ENST00000537981 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 COMMD10Q9Y6G5 202 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 RGPD2P0DJD1 1756 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 NUDT17P0C025 328 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 FOXN2P32314 431 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 ATP2C1P98194 919 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 CCDC6Q16204 474 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 LRRC74BQ6ZQY2 392 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 NCCRP1Q6ZVX7 275 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 GIMAP8Q8ND71 665 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 WDR60Q8WVS4 1066 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 APPBP2Q92624 585 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 TAF4BQ92750 862 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 RMND1Q9NWS8 449 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 TBC1D7Q9P0N9 293 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 FRMD4BQ9Y2L6 1034 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 DISP2A7MBM2 1401 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 HOXA2O43364 376 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 RNASEH1O60930 286 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 DEXIO95424 95 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 C7P10643 843 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 TBX4P57082 545 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 POLR2FP61218 127 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 KPNB1Q14974 876 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 INF2Q27J81 1249 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 FIGNQ5HY92 759 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 PIK3AP1Q6ZUJ8 805 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 SATL1Q86VE3 508 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 SPATA24Q86W54 205 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 SEC14L1Q92503 715 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 P2RX5Q93086 422 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 VCX3BQ9H321 246 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 VCX3AQ9NNX9 186 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 KCNK9Q9NPC2 374 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 SLCO1B3Q9NPD5 702 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 ARPP21Q9UBL0 812 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 SEC63Q9UGP8 760 aaKnown RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 ZNF180Q9UJW8 692 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
RTN3-208ENST00000537981 DAAM1Q9Y4D1 1078 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 HEY1Q9Y5J3 304 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 WDR19Q8NEZ3 1342 aa11.49□□□□□ -0.57
RTN3-208ENST00000537981 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 TMEM110-MUSTN1A8MSY1 372 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 NOL4O94818 638 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 PLEKHA8P1O95397 391 aa11.48□□□□□ -0.57
RTN3-208ENST00000537981 SERPINB3P29508 390 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms