RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 PACS2Q86VP3 889 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 ARHGEF26Q96DR7 871 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 LXNQ9BS40 222 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 WDR11Q9BZH6 1224 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 QTRT2Q9H974 415 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 SEPT11Q9NVA2 429 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 TAS2R14Q9NYV8 317 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 KCND2Q9NZV8 630 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 PPP1R37O75864 691 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 VIL1P09327 827 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 CCDC172P0C7W6 258 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 MYZAPP0CAP1 466 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 TNFAIP3P21580 790 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 MDH1P40925 334 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 BFSP1Q12934 665 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 NAA35Q5VZE5 725 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 SYCP3Q8IZU3 236 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 UBLCP1Q8WVY7 318 aaPredicted RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 EPN3Q9H201 632 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 RANBP17Q9H2T7 1088 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 EHMT1Q9H9B1 1298 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 GOPCQ9HD26 462 aa15.54■□□□□ 0.08
USP44-203ENST00000537435 HERC5Q9UII4 1024 aaKnown RBP15.54■□□□□ 0.08
USP44-203ENST00000537435 ARHGEF35A5YM69 484 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 HIP1RO75146 1068 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 HPDP32754 393 aaPredicted RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 DCAF12L1Q5VU92 463 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 PALB2Q86YC2 1186 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 HOOK2Q96ED9 719 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 TEKT3Q9BXF9 490 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 THAP2Q9H0W7 228 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 DPH5Q9H2P9 285 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 TTC7AQ9ULT0 858 aaPredicted RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 MRPL11Q9Y3B7 192 aaKnown RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 NR2E1Q9Y466 385 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 LRRN2O75325 713 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 GUCY2CP25092 1073 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 POU5F1Q01860 360 aaKnown RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 ZNF844Q08AG5 666 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 PRPF4BQ13523 1007 aaKnown RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 MICALL1Q8N3F8 863 aa15.53■□□□□ 0.08
USP44-203ENST00000537435 UTP11Q9Y3A2 253 aaKnown RBP15.53■□□□□ 0.08
USP44-203ENST00000537435 H0YIN7 160 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 DDX39AO00148 427 aaKnown RBP15.52■□□□□ 0.08
USP44-203ENST00000537435 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
USP44-203ENST00000537435 MAPK7Q13164 816 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 ZYXQ15942 572 aaKnown RBP15.52■□□□□ 0.08
USP44-203ENST00000537435 PTGISQ16647 500 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 B3GNT9Q6UX72 402 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 FMNL3Q8IVF7 1028 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 DAW1Q8N136 415 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 CHURC1Q8WUH1 139 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
USP44-203ENST00000537435 SEC14L1Q92503 715 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 STRA6Q9BX79 667 aa15.52■□□□□ 0.08
USP44-203ENST00000537435 CLRN2A0PK11 232 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 K7ENM7 598 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 FOXN3O00409 490 aaPredicted RBP15.52■□□□□ 0.07
USP44-203ENST00000537435 IPO5O00410 1097 aaKnown RBP15.52■□□□□ 0.07
USP44-203ENST00000537435 CPP00450 1065 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.07
USP44-203ENST00000537435 LIG3P49916 1009 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 MTMR3Q13615 1198 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 SLC9A9Q8IVB4 645 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 LMO3Q8TAP4 145 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 TRIM51Q9BSJ1 452 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 FAM114A2Q9NRY5 505 aa15.52■□□□□ 0.07
USP44-203ENST00000537435 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.07
USP44-203ENST00000537435 SLX4Q8IY92 1834 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 ANKRD62A6NC57 917 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 MYO1FO00160 1098 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 SEC24CP53992 1094 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 DLG4P78352 724 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 KIF22Q14807 665 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 TMC3Q7Z5M5 1100 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 ADAT2Q7Z6V5 191 aaKnown RBP15.51■□□□□ 0.07
USP44-203ENST00000537435 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 CARD9Q9H257 536 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 PCIF1Q9H4Z3 704 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 TMOD2Q9NZR1 351 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.51■□□□□ 0.07
USP44-203ENST00000537435 ZBTB21Q9ULJ3 1066 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 COG5Q9UP83 839 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 BCS1LQ9Y276 419 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 COL2A1P02458 1487 aaPredicted RBP15.51■□□□□ 0.07
USP44-203ENST00000537435 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 KRT13P13646 458 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 ZNF211Q13398 564 aaPredicted RBP15.51■□□□□ 0.07
USP44-203ENST00000537435 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 PADI6Q6TGC4 694 aa15.51■□□□□ 0.07
USP44-203ENST00000537435 RUFY4Q6ZNE9 571 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms