RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 EXOC8Q8IYI6 725 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 SMRP1Q8NCR6 262 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 MRPS27Q92552 414 aaKnown RBP15.62■□□□□ 0.09
SYNE1-235ENST00000537033 TCF25Q9BQ70 676 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 BRMS1Q9HCU9 246 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 CLEC1BQ9P126 229 aa15.62■□□□□ 0.09
SYNE1-235ENST00000537033 SUCLA2Q9P2R7 463 aaPredicted RBP15.62■□□□□ 0.09
SYNE1-235ENST00000537033 BARX2Q9UMQ3 279 aaPredicted RBP15.62■□□□□ 0.09
SYNE1-235ENST00000537033 IGKV6-21A0A0C4DH24 114 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 PER2O15055 1255 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 MAFO75444 373 aaPredicted RBP15.61■□□□□ 0.09
SYNE1-235ENST00000537033 SKIP12755 728 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 QARSP47897 775 aaKnown RBP15.61■□□□□ 0.09
SYNE1-235ENST00000537033 ERVFC1P60507 584 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 DRP2Q13474 957 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 DUSP6Q16828 381 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 TWF2Q6IBS0 349 aaKnown RBP15.61■□□□□ 0.09
SYNE1-235ENST00000537033 PIK3AP1Q6ZUJ8 805 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 HELQQ8TDG4 1101 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 SLC7A3Q8WY07 619 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 RSPH1Q8WYR4 309 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 NLRP4Q96MN2 994 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 SH2D3AQ9BRG2 576 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 KCNMB3Q9NPA1 279 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 NGRNQ9NPE2 291 aaKnown RBP15.61■□□□□ 0.09
SYNE1-235ENST00000537033 CYP26B1Q9NR63 512 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 RNF19AQ9NV58 838 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 SPG21Q9NZD8 308 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 TPCN1Q9ULQ1 816 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 PIN4Q9Y237 131 aaKnown RBP15.61■□□□□ 0.09
SYNE1-235ENST00000537033 ARID2Q68CP9 1835 aa15.61■□□□□ 0.09
SYNE1-235ENST00000537033 A0A087WZ62 844 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 CARNS1A5YM72 827 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 FSCN2O14926 492 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 TBX3O15119 743 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 CSDE1O75534 798 aaKnown RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 STBD1O95210 358 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 GLP2RO95838 553 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 P4HBP07237 508 aaKnown RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 RAB27AP51159 221 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 POLGP54098 1239 aaPredicted RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 BMS1Q14692 1282 aaKnown RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 CLLU1OSQ5K130 101 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 PLA2G4FQ68DD2 849 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 LRRC55Q6ZSA7 311 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 ANO5Q75V66 913 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 CATSPER4Q7RTX7 472 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 FDXACB1Q9BRP7 624 aaPredicted RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 ORC3Q9UBD5 711 aaPredicted RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 VAV3Q9UKW4 847 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 USP15Q9Y4E8 981 aaPredicted RBP15.6■□□□□ 0.09
SYNE1-235ENST00000537033 PPME1Q9Y570 386 aa15.6■□□□□ 0.09
SYNE1-235ENST00000537033 BAG4O95429 457 aaKnown RBP15.59■□□□□ 0.09
SYNE1-235ENST00000537033 KRT2P35908 639 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 PBX3P40426 434 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 PHKA2P46019 1235 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 ALDH7A1P49419 539 aaKnown RBP15.59■□□□□ 0.09
SYNE1-235ENST00000537033 GLB1LQ6UWU2 654 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 TMC7Q7Z402 723 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 ZNF598Q86UK7 904 aaKnown RBP15.59■□□□□ 0.09
SYNE1-235ENST00000537033 RNF135Q8IUD6 432 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 SLFN12Q8IYM2 578 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 CEP170P1Q96L14 293 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 CEP89Q96ST8 783 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 MUTYHQ9UIF7 546 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
SYNE1-235ENST00000537033 EML1O00423 815 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 CA8P35219 290 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 RFC5P40937 340 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 AK2P54819 239 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 SMC1AQ14683 1233 aaKnown RBP15.58■□□□□ 0.08
SYNE1-235ENST00000537033 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 OTUD6AQ7L8S5 288 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 OXER1Q8TDS5 423 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
SYNE1-235ENST00000537033 TMEM169Q96HH4 297 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 LXNQ9BS40 222 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 TRAIPQ9BWF2 469 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
SYNE1-235ENST00000537033 GAS2O43903 313 aaKnown RBP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 ZC3H11AO75152 810 aaKnown RBP eCLIP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 ATF7P17544 494 aaPredicted RBP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 YWHABP31946 246 aaKnown RBP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 TECP42680 631 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 NPEPPSP55786 919 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 TRIM29Q14134 588 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 EPHA7Q15375 998 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 HERC4Q5GLZ8 1057 aaPredicted RBP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 LLGL2Q6P1M3 1020 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 C4orf19Q8IY42 314 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 SLC39A11Q8N1S5 342 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 TMEM87AQ8NBN3 555 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 VN1R2Q8NFZ6 395 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 TCP11Q8WWU5 503 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 PGBD4Q96DM1 585 aa15.57■□□□□ 0.08
SYNE1-235ENST00000537033 PHF7Q9BWX1 381 aaPredicted RBP15.57■□□□□ 0.08
SYNE1-235ENST00000537033 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms