RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PCDHA6Q9UN73 950 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ARL2BPQ9Y2Y0 163 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PCDHB13Q9Y5F0 798 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 PCDHA8Q9Y5H6 950 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 ROBO3Q96MS0 1386 aa6.3□□□□□ -1.4
CHD4-206ENST00000536999 UBE4BO95155 1302 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 PALM3A6NDB9 673 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 BHMG1C9JSJ3 638 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 USP17L21D6R901 530 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 UBE2Q2LH0YL09 131 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 RNF225M0QZC1 329 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 PDXKO00764 312 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 TBX3O15119 743 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 TCEA3O75764 348 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 DCTN3O75935 186 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ATP6V1G2O95670 118 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 AFPP02771 609 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 TMEM253P0C7T8 217 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 MYBL2P10244 700 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 BCRP11274 1271 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 GAP43P17677 238 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 HPDP32754 393 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 CETN2P41208 172 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 PMS2P54278 862 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NAPAP54920 295 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 RWDD2BP57060 319 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 MAGOHP61326 146 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 SNRPFP62306 86 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 DR1Q01658 176 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 DHX9Q08211 1270 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 ZNF844Q08AG5 666 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 STK4Q13043 487 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 CALCOCO2Q13137 446 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 DYNC1I2Q13409 638 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 ACVR2BQ13705 512 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 RAPGEF1Q13905 1077 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NAA25Q14CX7 972 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 PDCD2Q16342 344 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 EXOC3L4Q17RC7 722 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 PARP6Q2NL67 630 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ASPRV1Q53RT3 343 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 FAM26FQ5R3K3 315 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 AP1ARQ63HQ0 302 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 HGSNATQ68CP4 663 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 KCTD16Q68DU8 428 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 HIBCHQ6NVY1 386 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 ALKBH5Q6P6C2 394 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 MOB2Q70IA6 237 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 SDCCAG8Q86SQ7 713 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 USP37Q86T82 979 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 SESTD1Q86VW0 696 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 TRIM59Q8IWR1 403 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ZC3H3Q8IXZ2 948 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 ARHGAP24Q8N264 748 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 AGGF1Q8N302 714 aaeCLIP6.29□□□□□ -1.4
CHD4-206ENST00000536999 TSEN2Q8NCE0 465 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 CASKIN2Q8WXE0 1202 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 RAPGEF5Q92565 580 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 MAGOHBQ96A72 148 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 TMEM237Q96Q45 408 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NOD2Q9HC29 1040 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NKIRAS1Q9NYS0 192 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ANKIB1Q9P2G1 1089 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 ABCF2Q9UG63 623 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NAGPAQ9UK23 515 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 PCDHB8Q9UN66 801 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NOVA2Q9UNW9 492 aaKnown RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 SLC12A4Q9UP95 1085 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 TRPC6Q9Y210 931 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 NIP7Q9Y221 180 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD4-206ENST00000536999 TRAF3IP3Q9Y228 551 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 USP15Q9Y4E8 981 aaPredicted RBP6.29□□□□□ -1.4
CHD4-206ENST00000536999 NFS1Q9Y697 457 aa6.29□□□□□ -1.4
CHD4-206ENST00000536999 LRRD1A4D1F6 860 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 TRIM49BA6NDI0 452 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 RCCD1A6NED2 376 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 SMCO2A6NFE2 343 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 ENO4A6NNW6 628 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 F8VZ95 297 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 MYO1FO00160 1098 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 P4HA2O15460 535 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 RAD51CO43502 376 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 NEBLO76041 1014 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 ABL1P00519 1130 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 EGFRP00533 1210 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 ATP5BP06576 529 aaKnown RBP6.28□□□□□ -1.4
CHD4-206ENST00000536999 MMEP08473 750 aa6.28□□□□□ -1.4
CHD4-206ENST00000536999 VIMP08670 466 aaKnown RBP6.28□□□□□ -1.4
CHD4-206ENST00000536999 ALADP13716 330 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms