RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 KIR2DL1P43626 348 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 KIR2DL2P43627 348 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 CHRNEQ04844 493 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 DLGAP5Q15398 846 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 MTHFSDQ2M296 383 aaKnown RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 RTP2Q5QGT7 225 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 STRIP1Q5VSL9 837 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 KSR1Q8IVT5 923 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 ANKS4BQ8N8V4 417 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 FCRL3Q96P31 734 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 SENP6Q9GZR1 1112 aaPredicted RBP8.32□□□□□ -1.08
CCDC60-203ENST00000536742 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 TNFRSF10DQ9UBN6 386 aa8.32□□□□□ -1.08
CCDC60-203ENST00000536742 ANKRD11Q6UB99 2663 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-203ENST00000536742 SIPA1L3O60292 1781 aaPredicted RBP8.31□□□□□ -1.08
CCDC60-203ENST00000536742 TMEM82A0PJX8 343 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 RPL10P27635 214 aaKnown RBP8.31□□□□□ -1.08
CCDC60-203ENST00000536742 GDNFP39905 211 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 SEPHS1P49903 392 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 MAP4K2Q12851 820 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 PPIL2Q13356 520 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 C2orf27AQ580R0 203 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 SPPL2CQ8IUH8 684 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 OXR1Q8N573 874 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 NGEFQ8N5V2 710 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 PDZD8Q8NEN9 1154 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 PRSS33Q8NF86 280 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.31□□□□□ -1.08
CCDC60-203ENST00000536742 FAM168AQ92567 244 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 COPS5Q92905 334 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
CCDC60-203ENST00000536742 TESK2Q96S53 571 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 PIF1Q9H611 641 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 SLAMF8Q9P0V8 285 aa8.31□□□□□ -1.08
CCDC60-203ENST00000536742 CFAP47Q6ZTR5 3102 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 C2orf71A6NGG8 1288 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 FGF10O15520 208 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-203ENST00000536742 DCXO43602 365 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 GSTM1P09488 218 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 TNFAIP1Q13829 316 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 PKN1Q16512 942 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 IQCEQ6IPM2 695 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 CCDC129Q6ZRS4 1044 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 IL17REQ8NFR9 667 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 LINC01599Q8WXQ3 324 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 KCTD13Q8WZ19 329 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
CCDC60-203ENST00000536742 MAP6Q96JE9 813 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 PRDM7Q9NQW5 492 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 ARHGEF4Q9NR80 690 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 GPR55Q9Y2T6 319 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-203ENST00000536742 ECM29Q5VYK3 1845 aa8.3□□□□□ -1.08
CCDC60-203ENST00000536742 REV3LO60673 3130 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
CCDC60-203ENST00000536742 FITM1A5D6W6 292 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 RBAK-RBAKDNI3L0D1 243 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 KCNQ3O43525 872 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 VAMP4O75379 141 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 GFRA1P56159 465 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 RTP1P59025 263 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 PPATQ06203 517 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 NR0B2Q15466 257 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 TESK1Q15569 626 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 ST3GAL2Q16842 350 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 ACBD5Q5T8D3 534 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-203ENST00000536742 HLA-DQA1Q5Y7H0 255 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 E4F1Q66K89 784 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-203ENST00000536742 SCUBE1Q8IWY4 988 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 NAT16Q8N8M0 369 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 BTN2A2Q8WVV5 523 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 PFDN2Q9UHV9 154 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
CCDC60-203ENST00000536742 TPRP12270 2363 aaKnown RBP8.28□□□□□ -1.08
CCDC60-203ENST00000536742 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 STXBP3O00186 592 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 DIAPH1O60610 1272 aaKnown RBP8.28□□□□□ -1.08
CCDC60-203ENST00000536742 SNRPB2P08579 225 aaKnown RBP8.28□□□□□ -1.08
CCDC60-203ENST00000536742 RAC2P15153 192 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 IFNGR1P15260 489 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 RPS8P62241 208 aaKnown RBP8.28□□□□□ -1.08
CCDC60-203ENST00000536742 RAB30Q15771 203 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 DPY19L1Q2PZI1 675 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 TMEM67Q5HYA8 995 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 MAP3K21Q5TCX8 1036 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 TTLL7Q6ZT98 887 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 DGLUCYQ7Z3D6 616 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 LILRA2Q8N149 483 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 SYNPOQ8N3V7 929 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 PTCHD1Q96NR3 888 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 MXD3Q9BW11 206 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 ERVK13-1Q9NX77 482 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 MSRAQ9UJ68 235 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms