RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CCNT1O60563 726 aaKnown RBP13.97□□□□□ -0.17
PRKDC-207ENST00000536483 DTNBO60941 627 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 GPR32O75388 356 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 FAM189BP81408 668 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 TRIM29Q14134 588 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 UGCGQ16739 394 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 CCDC83Q8IWF9 413 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 SLFN12Q8IYM2 578 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 COLGALT1Q8NBJ5 622 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 VN1R2Q8NFZ6 395 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 GJA10Q969M2 543 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 TBC1D32Q96NH3 1257 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 CWH43Q9H720 699 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 TMEM161AQ9NX61 479 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 PPME1Q9Y570 386 aa13.97□□□□□ -0.17
PRKDC-207ENST00000536483 FNDC1Q4ZHG4 1894 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 EML1O00423 815 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 PSMC5P62195 406 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 CDC42EP1Q00587 391 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 PRKCEQ02156 737 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 ORC2Q13416 577 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 DSC3Q14574 896 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 EPHA7Q15375 998 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 DUSP6Q16828 381 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 TRIM67Q6ZTA4 783 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 RPGRIP1Q96KN7 1286 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 PHF7Q9BWX1 381 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 FOXP1Q9H334 677 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 UPF2Q9HAU5 1272 aaKnown RBP13.96□□□□□ -0.17
PRKDC-207ENST00000536483 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
PRKDC-207ENST00000536483 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 TMEM221A6NGB7 291 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 M0R296 226 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 FSCN2O14926 492 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 ST18O60284 1047 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 DKC1O60832 514 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRKDC-207ENST00000536483 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
PRKDC-207ENST00000536483 LAG3P18627 525 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 TMOD1P28289 359 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
PRKDC-207ENST00000536483 MCM2P49736 904 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 CLCN3P51790 818 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 ZXDAP98168 799 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 PLPP4Q5VZY2 271 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 LRRC55Q6ZSA7 311 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 C4orf19Q8IY42 314 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 PBXIP1Q96AQ6 731 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 CDCA3Q99618 268 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-207ENST00000536483 TMEM117Q9H0C3 514 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 ADAMTS10Q9H324 1103 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 AKT3Q9Y243 479 aa13.95□□□□□ -0.18
PRKDC-207ENST00000536483 CHMP2AO43633 222 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 LYPLA2O95372 231 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 NLRP11P59045 1033 aaKnown RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 PLCB3Q01970 1234 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 SAFBQ15424 915 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 IER5LQ5T953 404 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 PDE12Q6L8Q7 609 aaKnown RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 EFCAB12Q6NXP0 572 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 ANO5Q75V66 913 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 LRRC71Q8N4P6 559 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 SUSD6Q92537 303 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 MRPS27Q92552 414 aaKnown RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 C8orf76Q96K31 380 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 ZNF668Q96K58 619 aaPredicted RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 HSD17B14Q9BPX1 270 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 TCF25Q9BQ70 676 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 RNF19AQ9NV58 838 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
PRKDC-207ENST00000536483 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
PRKDC-207ENST00000536483 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 MAFO75444 373 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-207ENST00000536483 ZSCAN20P17040 1043 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-207ENST00000536483 ATF7P17544 494 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-207ENST00000536483 EIF4BP23588 611 aaKnown RBP13.93□□□□□ -0.18
PRKDC-207ENST00000536483 PBX3P40426 434 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 TECP42680 631 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 TRAPPC10P48553 1259 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 KCNC3Q14003 757 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 EXOC8Q8IYI6 725 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 ABI1Q8IZP0 508 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 PRSS33Q8NF86 280 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
PRKDC-207ENST00000536483 PCDHA12Q9UN75 941 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms