RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 POLR3CQ9BUI4 534 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-206ENST00000536398 ATP6V0A4Q9HBG4 840 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.91■□□□□ 0.14
UBE3B-206ENST00000536398 TMEM161AQ9NX61 479 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 LMCD1Q9NZU5 365 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 C5orf67F2Z3F1 127 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 DLL1O00548 723 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 CSPG5O95196 566 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 TFF2Q03403 129 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 CATSPER4Q7RTX7 472 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 RNF149Q8NC42 400 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 TCP11Q8WWU5 503 aa15.9■□□□□ 0.14
UBE3B-206ENST00000536398 MRPL38Q96DV4 380 aaKnown RBP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 ELAC1Q9H777 363 aaKnown RBP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 TYW1Q9NV66 732 aaKnown RBP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-206ENST00000536398 PP2D1A8MPX8 630 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 RB1P06400 928 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 ATF7P17544 494 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 SFPQP23246 707 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 DNAJB1P25685 340 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 RPA1P27694 616 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 ARL2P36404 184 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 LONRF3Q496Y0 759 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 CLLU1OSQ5K130 101 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 LRRC55Q6ZSA7 311 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 ZNF598Q86UK7 904 aaKnown RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 EXOC8Q8IYI6 725 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 CASD1Q96PB1 797 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 COL25A1Q9BXS0 654 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 ALG13Q9NP73 1137 aaKnown RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 GPRC5CQ9NQ84 441 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 THEGQ9P2T0 379 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 LRWD1Q9UFC0 647 aa15.89■□□□□ 0.13
UBE3B-206ENST00000536398 PIN4Q9Y237 131 aaKnown RBP15.89■□□□□ 0.13
UBE3B-206ENST00000536398 A0A0U1RQF3 1178 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 GAS2O43903 313 aaKnown RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 DGAT1O75907 488 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 GLRA2P23416 452 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 CDC25AP30304 524 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 HOXA11P31270 313 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 CCT6AP40227 531 aaKnown RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 FAM43BQ6ZT52 329 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 KLHL23Q8NBE8 558 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 ERMNQ8TAM6 284 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 LPPQ93052 612 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 NACC1Q96RE7 527 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 C11orf84Q9BUA3 381 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-206ENST00000536398 CWH43Q9H720 699 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 POLD4Q9HCU8 107 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 CHST12Q9NRB3 414 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 PLAGL2Q9UPG8 496 aa15.88■□□□□ 0.13
UBE3B-206ENST00000536398 NLRC5Q86WI3 1866 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 MEIS3P2A8K0S8 358 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 ASAP2O43150 1006 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 ITGB1P05556 798 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 PHKA2P46019 1235 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 PTENP60484 403 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 CAPSQ13938 189 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 CAMK1Q14012 370 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 PDIA5Q14554 519 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 PTPROQ16827 1216 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 SPOUT1Q5T280 376 aaKnown RBP15.87■□□□□ 0.13
UBE3B-206ENST00000536398 TWF2Q6IBS0 349 aaKnown RBP15.87■□□□□ 0.13
UBE3B-206ENST00000536398 SRGAP1Q7Z6B7 1085 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 SPPL3Q8TCT6 385 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 ATXN2LQ8WWM7 1075 aaKnown RBP15.87■□□□□ 0.13
UBE3B-206ENST00000536398 CCDC43Q96MW1 224 aaKnown RBP15.87■□□□□ 0.13
UBE3B-206ENST00000536398 ASB2Q96Q27 587 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 AGPAT5Q9NUQ2 364 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 DACT1Q9NYF0 836 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 DBR1Q9UK59 544 aaKnown RBP15.87■□□□□ 0.13
UBE3B-206ENST00000536398 RWDD3Q9Y3V2 267 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
UBE3B-206ENST00000536398 PBX3P40426 434 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 KCNQ1P51787 676 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 MRPS5P82675 430 aaKnown RBP15.86■□□□□ 0.13
UBE3B-206ENST00000536398 MXD4Q14582 209 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-206ENST00000536398 RILPL1Q5EBL4 403 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 TCEAL5Q5H9L2 206 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 UBXN11Q5T124 520 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 HELQQ8TDG4 1101 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 BSNDQ8WZ55 320 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 MMTAG2Q9BU76 263 aaKnown RBP15.86■□□□□ 0.13
UBE3B-206ENST00000536398 PLVAPQ9BX97 442 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 TMEM117Q9H0C3 514 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 FAM105AQ9NUU6 356 aa15.86■□□□□ 0.13
UBE3B-206ENST00000536398 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-206ENST00000536398 KIAA1024Q9UPX6 916 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms