RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZBTB39O15060 712 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 LINC01565O15544 149 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 HOXA2O43364 376 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 NCK2O43639 380 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 NEMFO60524 1076 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 FGF18O76093 207 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 TXKP42681 527 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 COL19A1Q14993 1142 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 XKR9Q5GH70 373 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 RBM23Q86U06 439 aaKnown RBP15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 C4orf19Q8IY42 314 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 HELQQ8TDG4 1101 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 MICAL1Q8TDZ2 1067 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 PPP2R3CQ969Q6 453 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 INO80BQ9C086 356 aaPredicted RBP15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 ZSWIM4Q9H7M6 989 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 TTC12Q9H892 705 aaPredicted RBP15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 DACT1Q9NYF0 836 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 PCDHA12Q9UN75 941 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 PIN4Q9Y237 131 aaKnown RBP15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 COL4A3BPQ9Y5P4 624 aa15.98■□□□□ 0.15
RTN3P1-201ENST00000536295 A0A0U1RQF3 1178 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 GRXCR2A6NFK2 248 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 SRGAP2CP0DJJ0 459 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 LAG3P18627 525 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 LTBRP36941 435 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 PBX3P40426 434 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 RFC5P40937 340 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 NRIP1P48552 1158 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 PUS10Q3MIT2 529 aaKnown RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 LONRF3Q496Y0 759 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 TWF2Q6IBS0 349 aaKnown RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 CATSPER4Q7RTX7 472 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 LRRC43Q8N309 656 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 EIF2AK1Q9BQI3 630 aaKnown RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 DHX33Q9H6R0 707 aaKnown RBP15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 CD320Q9NPF0 282 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 CHST12Q9NRB3 414 aa15.97■□□□□ 0.15
RTN3P1-201ENST00000536295 TBX10O75333 385 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 SLITRK3O94933 977 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 ATF7P17544 494 aaPredicted RBP15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 SSTR3P32745 418 aaPredicted RBP15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 MCM7P33993 719 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 NDUFV1P49821 464 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 EMC2Q15006 297 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 CTC1Q2NKJ3 1217 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 FAM178BQ8IXR5 827 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 PSPC1Q8WXF1 523 aaKnown RBP15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 KIF2CQ99661 725 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 TLR9Q9NR96 1032 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 PPME1Q9Y570 386 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 PLXNA4Q9HCM2 1894 aa15.96■□□□□ 0.15
RTN3P1-201ENST00000536295 EOMESO95936 686 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 PHKA2P46019 1235 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 ERVFC1P60507 584 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 UBE3AQ05086 875 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 LAMTOR4Q0VGL1 99 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 ADAM15Q13444 863 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 GJD3Q8N144 294 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 KHSRPQ92945 711 aaKnown RBP eCLIP15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 LPPQ93052 612 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 ZNF558Q96NG5 402 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 MTRQ99707 1265 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 LLPHQ9BRT6 129 aaKnown RBP15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 TMEM60Q9H2L4 133 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 IFT122Q9HBG6 1241 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 FAM50BQ9Y247 325 aa15.95■□□□□ 0.14
RTN3P1-201ENST00000536295 A0A087WWV3 80 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 POTEMA6NI47 508 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 PER2O15055 1255 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 PLPP4Q5VZY2 271 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 RNF149Q8NC42 400 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 TCP11Q8WWU5 503 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 MTMR9Q96QG7 549 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 HSD17B14Q9BPX1 270 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 EPHX3Q9H6B9 360 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 TLE6Q9H808 572 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 MINDY3Q9H8M7 445 aa15.94■□□□□ 0.14
RTN3P1-201ENST00000536295 BDP1A6H8Y1 2624 aa15.93■□□□□ 0.14
RTN3P1-201ENST00000536295 GAS2O43903 313 aaKnown RBP15.93■□□□□ 0.14
RTN3P1-201ENST00000536295 SKIP12755 728 aa15.93■□□□□ 0.14
RTN3P1-201ENST00000536295 ZNF174Q15697 407 aa15.93■□□□□ 0.14
RTN3P1-201ENST00000536295 SRGAP1Q7Z6B7 1085 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms