RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 EMBQ6PCB8 327 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GBP6Q6ZN66 633 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SMIM5Q71RC9 77 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TMC7Q7Z402 723 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TEX11Q8IYF3 940 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GOLGA6L1Q8N7Z2 621 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 EIF1ADQ8N9N8 165 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 C1orf131Q8NDD1 294 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 SMCR8Q8TEV9 937 aaPredicted RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 HPS3Q969F9 1004 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MBOAT7Q96N66 472 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 ALS2CR12Q96Q35 445 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 NAP1L4Q99733 375 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 TSG101Q99816 390 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 LRRC1Q9BTT6 524 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 RASSF4Q9H2L5 321 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CPVLQ9H3G5 476 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 GDF3Q9NR23 364 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 MTMR4Q9NYA4 1195 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 AIPL1Q9NZN9 384 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 KLK14Q9P0G3 267 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 CEP72Q9P209 647 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 DMGDHQ9UI17 866 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 RTCBQ9Y3I0 505 aaKnown RBP6.3□□□□□ -1.4
VPS33A-203ENST00000536212 PCDHA2Q9Y5H9 948 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 NAV1Q8NEY1 1877 aa6.3□□□□□ -1.4
VPS33A-203ENST00000536212 KDM3AQ9Y4C1 1321 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 PNMA6FA0A0J9YX94 578 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 FRMD3A2A2Y4 597 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CES2O00748 559 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MAFGO15525 162 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 AKR1B10O60218 316 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 OPA1O60313 960 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 FZD6O60353 706 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 TLR2O60603 784 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 NOL4O94818 638 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CPP00450 1065 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MYBP10242 640 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 ITGB7P26010 798 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 PAFAH1B1P43034 410 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MAGEA9P43362 315 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 EPHB4P54760 987 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 KCNQ4P56696 695 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CORO7P57737 925 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 HDLBPQ00341 1268 aaKnown RBP6.29□□□□□ -1.4
VPS33A-203ENST00000536212 APBA1Q02410 837 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 ZNF543Q08ER8 600 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 PPFIA1Q13136 1202 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 NFIXQ14938 502 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 NAB2Q15742 525 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 VPS72Q15906 364 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 EZH2Q15910 746 aaKnown RBP6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 FAM26FQ5R3K3 315 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 KRT79Q5XKE5 535 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 DPY19L2P1Q6NXN4 242 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MOXD1Q6UVY6 613 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 RRAGAQ7L523 313 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 TRIM59Q8IWR1 403 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CD302Q8IX05 232 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MYOCDQ8IZQ8 938 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MREGQ8N565 214 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 FAM76AQ8TAV0 307 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 TBC1D22AQ8WUA7 517 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 HAS1Q92839 578 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 IFT43Q96FT9 208 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 EEF2KMTQ96G04 330 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CDK5RAP3Q96JB5 506 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 CRACR2AQ9BSW2 395 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 GANQ9H2C0 597 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 FAM207AQ9NSI2 230 aaPredicted RBP6.29□□□□□ -1.4
VPS33A-203ENST00000536212 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 ANKIB1Q9P2G1 1089 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SWAP70Q9UH65 585 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SUGT1Q9Y2Z0 365 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 SBF2Q86WG5 1849 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 MYH8P13535 1937 aa6.29□□□□□ -1.4
VPS33A-203ENST00000536212 PITPNM2Q9BZ72 1349 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 CYP3A7-CYP3A51PA0A087WV96 503 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GOLGA6BA6NDN3 693 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 SCAMP3O14828 347 aaKnown RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 ZBTB39O15060 712 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PHACTR2O75167 634 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 CYP11B2P19099 503 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 MX2P20592 715 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 CYP3A7P24462 503 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 ANXA13P27216 316 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 SLC1A4P43007 532 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 IRAK1P51617 712 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms