RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 DDX25Q9UHL0 483 aaKnown RBP23.15■■□□□ 1.3
LTBR-205ENST00000535739 KCNJ14Q9UNX9 436 aa23.15■■□□□ 1.3
LTBR-205ENST00000535739 A0A087WZ62 844 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 IGKV6-21A0A0C4DH24 114 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 FSD2A1L4K1 749 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 SLC37A4O43826 429 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 EOMESO95936 686 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 PPM1AP35813 382 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 KRT17Q04695 432 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 KCNC3Q14003 757 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 GALNT17Q6IS24 598 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 LLGL2Q6P1M3 1020 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 EDAQ92838 391 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 RPGRIP1Q96KN7 1286 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 FDXACB1Q9BRP7 624 aaPredicted RBP23.14■■□□□ 1.29
LTBR-205ENST00000535739 PHF7Q9BWX1 381 aaPredicted RBP23.14■■□□□ 1.29
LTBR-205ENST00000535739 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 DACT1Q9NYF0 836 aa23.14■■□□□ 1.29
LTBR-205ENST00000535739 EML1O00423 815 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 TECP42680 631 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 DNM2P50570 870 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 CDC42EP1Q00587 391 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 CBX2Q14781 532 aaPredicted RBP23.13■■□□□ 1.29
LTBR-205ENST00000535739 LETM2Q2VYF4 491 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 TMEM184AQ6ZMB5 413 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 KRT25Q7Z3Z0 450 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 TMC7Q7Z402 723 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 SUSD6Q92537 303 aa23.13■■□□□ 1.29
LTBR-205ENST00000535739 NGRNQ9NPE2 291 aaKnown RBP23.13■■□□□ 1.29
LTBR-205ENST00000535739 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
LTBR-205ENST00000535739 DTNBO60941 627 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 MAFO75444 373 aaPredicted RBP23.12■■□□□ 1.29
LTBR-205ENST00000535739 PSMC5P62195 406 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 PLA2G4FQ68DD2 849 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 ANKRD54Q6NXT1 300 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 ANO5Q75V66 913 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 RHPN2Q8IUC4 686 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 KSR1Q8IVT5 923 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 FAM177A1Q8N128 213 aaPredicted RBP23.12■■□□□ 1.29
LTBR-205ENST00000535739 SLC39A11Q8N1S5 342 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 APOL5Q9BWW9 433 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 S1PR5Q9H228 398 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 CHST12Q9NRB3 414 aa23.12■■□□□ 1.29
LTBR-205ENST00000535739 NT5C1B-RDH14C9J2C7 533 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 SRGAP2BP0DMP2 458 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 PHKA2P46019 1235 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 SCRN1Q12765 414 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 LONRF3Q496Y0 759 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 SYCE2Q6PIF2 218 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 LPPQ93052 612 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 PHF20Q9BVI0 1012 aa23.11■■□□□ 1.29
LTBR-205ENST00000535739 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 SFPQP23246 707 aaKnown RBP eCLIP23.1■■□□□ 1.29
LTBR-205ENST00000535739 BCAR1P56945 870 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 TWF2Q6IBS0 349 aaKnown RBP23.1■■□□□ 1.29
LTBR-205ENST00000535739 ZNF410Q86VK4 478 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 MFSD14AQ96MC6 490 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 FBXL18Q96ME1 805 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 NLRP4Q96MN2 994 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 MRPL9Q9BYD2 267 aaKnown RBP23.1■■□□□ 1.29
LTBR-205ENST00000535739 SLKQ9H2G2 1235 aaPredicted RBP23.1■■□□□ 1.29
LTBR-205ENST00000535739 GJB4Q9NTQ9 266 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 VAV3Q9UKW4 847 aa23.1■■□□□ 1.29
LTBR-205ENST00000535739 PIN4Q9Y237 131 aaKnown RBP23.1■■□□□ 1.29
LTBR-205ENST00000535739 ZDBF2Q9HCK1 2354 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 CCDC194A0A1B0GVG4 234 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 ALDH7A1P49419 539 aaKnown RBP23.09■■□□□ 1.29
LTBR-205ENST00000535739 NPEPPSP55786 919 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 PPP2R5CQ13362 524 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 SMC1AQ14683 1233 aaKnown RBP23.09■■□□□ 1.29
LTBR-205ENST00000535739 TRIM67Q6ZTA4 783 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 MRPL43Q8N983 215 aaKnown RBP23.09■■□□□ 1.29
LTBR-205ENST00000535739 ZNF579Q8NAF0 562 aaKnown RBP23.09■■□□□ 1.29
LTBR-205ENST00000535739 TRAIPQ9BWF2 469 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 INO80BQ9C086 356 aaPredicted RBP23.09■■□□□ 1.29
LTBR-205ENST00000535739 KCNMB3Q9NPA1 279 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 CYP26B1Q9NR63 512 aa23.09■■□□□ 1.29
LTBR-205ENST00000535739 TMEM221A6NGB7 291 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 C2orf71A6NGG8 1288 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 MEIS3P2A8K0S8 358 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 M0R296 226 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 CDKL5O76039 1030 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 QARSP47897 775 aaKnown RBP23.08■■□□□ 1.29
LTBR-205ENST00000535739 ZXDAP98168 799 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 CATSPER4Q7RTX7 472 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 NEK8Q86SG6 692 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 OXER1Q8TDS5 423 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 FAM20AQ96MK3 541 aa23.08■■□□□ 1.29
LTBR-205ENST00000535739 WRAP73Q9P2S5 460 aaPredicted RBP23.08■■□□□ 1.29
LTBR-205ENST00000535739 ZC3H11AO75152 810 aaKnown RBP eCLIP23.07■■□□□ 1.28
LTBR-205ENST00000535739 CA8P35219 290 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 PIK3AP1Q6ZUJ8 805 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 ALYREFQ86V81 257 aaKnown RBP23.07■■□□□ 1.28
LTBR-205ENST00000535739 TMEM173Q86WV6 379 aaPredicted RBP23.07■■□□□ 1.28
LTBR-205ENST00000535739 TMEM169Q96HH4 297 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
LTBR-205ENST00000535739 KCNH6Q9H252 994 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 IFT122Q9HBG6 1241 aa23.07■■□□□ 1.28
LTBR-205ENST00000535739 FAM105AQ9NUU6 356 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms