RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 EFHBQ8N7U6 833 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 CEP170P1Q96L14 293 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 FDXACB1Q9BRP7 624 aaPredicted RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 TLE6Q9H808 572 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 PUF60Q9UHX1 559 aaKnown RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 CD207Q9UJ71 328 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 PPME1Q9Y570 386 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 LINC01565O15544 149 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 TBX10O75333 385 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 POLGP54098 1239 aaPredicted RBP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 NPEPPSP55786 919 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 SMAD4Q13485 552 aaKnown RBP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 TMEM31Q5JXX7 168 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 NCAPH2Q6IBW4 605 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 PDE12Q6L8Q7 609 aaKnown RBP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 OTUD6AQ7L8S5 288 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 NSUN7Q8NE18 718 aaKnown RBP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 KHSRPQ92945 711 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 NLRP4Q96MN2 994 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 LXNQ9BS40 222 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
CLSTN3-204ENST00000535313 FAM205CA6NFA0 338 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 PI4K2BG5E9Z4 385 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 MBTPS2O43462 519 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 SKIP12755 728 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 PPM1AP35813 382 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 RFC5P40937 340 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 ZP2Q05996 745 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 SMAD2Q15796 467 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 LRRC55Q6ZSA7 311 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 CATSPER4Q7RTX7 472 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 ZNF598Q86UK7 904 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 KSR1Q8IVT5 923 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 ADHFE1Q8IWW8 467 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 MRPS27Q92552 414 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 TNFRSF25Q93038 417 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 ZNF558Q96NG5 402 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 ZSWIM4Q9H7M6 989 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 PIN4Q9Y237 131 aaKnown RBP18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 LZTS1Q9Y250 596 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 PCDHGC5Q9Y5F6 944 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 COL4A3BPQ9Y5P4 624 aa18.11■□□□□ 0.49
CLSTN3-204ENST00000535313 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 JAK2O60674 1132 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 ALADP13716 330 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 YWHABP31946 246 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 FOSBP53539 338 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 PLCB3Q01970 1234 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 KRT17Q04695 432 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 CLLU1OSQ5K130 101 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 HELQQ8TDG4 1101 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 PSPC1Q8WXF1 523 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 DYDC2Q96IM9 177 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 POP1Q99575 1024 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 CDCA3Q99618 268 aaPredicted RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 MRPL9Q9BYD2 267 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 DHX33Q9H6R0 707 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 WRAP73Q9P2S5 460 aaPredicted RBP18.1■□□□□ 0.49
CLSTN3-204ENST00000535313 PLXNA4Q9HCM2 1894 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 BTBD18B2RXH4 712 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 PER2O15055 1255 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 GAS2O43903 313 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 PHKA2P46019 1235 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 ERVFC1P60507 584 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 CYP4A11Q02928 519 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 CTTNQ14247 550 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 CALCRLQ16602 461 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 TPH2Q8IWU9 490 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 TMEM143Q96AN5 459 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 MSLNLQ96KJ4 702 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 LRFN3Q9BTN0 628 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 TRAIPQ9BWF2 469 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 ENTPD7Q9NQZ7 604 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 CLEC1BQ9P126 229 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
CLSTN3-204ENST00000535313 FSCN2O14926 492 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 GPR37L1O60883 481 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 SEC24BO95487 1268 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 EYA4O95677 639 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 ATF7P17544 494 aaPredicted RBP18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 PBX3P40426 434 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 SPIRE1Q08AE8 756 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 COASYQ13057 564 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 EMC2Q15006 297 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 DUSP6Q16828 381 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 XKR9Q5GH70 373 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 PLPP4Q5VZY2 271 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 TCP11Q8WWU5 503 aa18.08■□□□□ 0.48
CLSTN3-204ENST00000535313 PRPF31Q8WWY3 499 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms