RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZC3H11AO75152 810 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 GPR32O75388 356 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 MS4A1P11836 297 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 LAMP2P13473 410 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 STAT5BP51692 787 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 CRYBB1P53674 252 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 HTR4Q13639 388 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 ZNF598Q86UK7 904 aaKnown RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 CMASQ8NFW8 434 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 STAMQ92783 540 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 TNPO1Q92973 898 aaKnown RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 SHDQ96IW2 340 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 CDHR1Q96JP9 859 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 PHF12Q96QT6 1004 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 JPH1Q9HDC5 661 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 ZMIZ1Q9ULJ6 1067 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 CLUHO75153 1309 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 LOXHD1Q8IVV2 1947 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 COL4A3Q01955 1670 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 MEIS2O14770 477 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 LILRB3O75022 631 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 RFPL2O75678 378 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 VTNP04004 478 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLIP1-206ENST00000535290 GALTP07902 379 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 C1QTNF9P0C862 333 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 CD72P21854 359 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 ACTR2P61160 394 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 TRAF1Q13077 416 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 MTMR1Q13613 665 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 PIBF1Q8WXW3 757 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 EMILIN2Q9BXX0 1053 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 MAN1C1Q9NR34 630 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 UBIAD1Q9Y5Z9 338 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 FRYQ5TBA9 3013 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 BAZ2BQ9UIF8 2168 aaKnown RBP9.48□□□□□ -0.89
CLIP1-206ENST00000535290 MYH6P13533 1939 aa9.48□□□□□ -0.89
CLIP1-206ENST00000535290 A0A0U1RQF3 1178 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 ZBTB42B2RXF5 422 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 ZNF213O14771 459 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 INPPL1O15357 1258 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 B4GALT3O60512 393 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 MX1P20591 662 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 NMIQ13287 307 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 MLF2Q15773 248 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 SLC44A4Q53GD3 710 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 IFIT1BQ5T764 474 aaKnown RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 PRR23CQ6ZRP0 262 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 SMG7Q92540 1137 aaKnown RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 ZNF707Q96C28 371 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 EVI5LQ96CN4 794 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 MRPL9Q9BYD2 267 aaKnown RBP9.47□□□□□ -0.89
CLIP1-206ENST00000535290 RHOBTB2Q9BYZ6 727 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 OSBPL6Q9BZF3 934 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 NRDE2Q9H7Z3 1164 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 LTB4R2Q9NPC1 389 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 SEMA4GQ9NTN9 838 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 DOCK8Q8NF50 2099 aa9.47□□□□□ -0.89
CLIP1-206ENST00000535290 ASPMQ8IZT6 3477 aa9.46□□□□□ -0.89
CLIP1-206ENST00000535290 PIK3CDO00329 1044 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 HBP1O60381 514 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 C22orf31O95567 290 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 RETP07949 1114 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 SLC11A1P49279 550 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 CLCN6P51797 869 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 GRM4Q14833 912 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 SEC23AQ15436 765 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 LAIR1Q6GTX8 287 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 PARM1Q6UWI2 310 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 GET4Q7L5D6 327 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-206ENST00000535290 FGF14Q92915 247 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 CUL5Q93034 780 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 CLDN23Q96B33 292 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF668Q96K58 619 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-206ENST00000535290 UBAC1Q9BSL1 405 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 CHMP4BQ9H444 224 aaKnown RBP9.46□□□□□ -0.9
CLIP1-206ENST00000535290 PRMT8Q9NR22 394 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-206ENST00000535290 TBC1D13Q9NVG8 400 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLIP1-206ENST00000535290 DNAJB4Q9UDY4 337 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 ZZEF1O43149 2961 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.9
CLIP1-206ENST00000535290 C2CD2LO14523 706 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 TM4SF5O14894 197 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 LRP3O75074 770 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 SPATA31D3P0C874 917 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 TDGF1P13385 188 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 FGFR4P22455 802 aa9.45□□□□□ -0.9
CLIP1-206ENST00000535290 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
CLIP1-206ENST00000535290 NT5C2P49902 561 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms