RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 KCNH3Q9ULD8 1083 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 PCDHA11Q9Y5I1 949 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 MYH1P12882 1939 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 LOC285556D6RIA3 1793 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 SZT2Q5T011 3432 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 RBM47A0AV96 593 aaKnown RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 C19orf81C9J6K1 198 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 H0YGN5 161 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 PEX10O60683 326 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 SGPL1O95470 568 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 HLA-DOAP06340 250 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 ZGLP1P0C6A0 271 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 EGR3Q06889 387 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATM-224ENST00000534625 TATDN1Q6P1N9 297 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 TMED8Q6PL24 325 aaPredicted RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 MPZL3Q6UWV2 235 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 CRACR2BQ8N4Y2 399 aaPredicted RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 ABHD4Q8TB40 342 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 U2AF1L4Q8WU68 220 aaKnown RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 COA7Q96BR5 231 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 P2RX7Q99572 595 aaKnown RBP6.26□□□□□ -1.41
ATM-224ENST00000534625 TXNRD2Q9NNW7 524 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 IL1RAPL2Q9NP60 686 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 ZBTB40Q9NUA8 1239 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 MORF4L1Q9UBU8 362 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 ZBTB21Q9ULJ3 1066 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
ATM-224ENST00000534625 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 RGS13O14921 159 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 UBOX5O94941 541 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 GH2P01242 217 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 EIF4A3P38919 411 aaKnown RBP6.25□□□□□ -1.41
ATM-224ENST00000534625 FXR1P51114 621 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATM-224ENST00000534625 PLCD1P51178 756 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 HERVK_113P62684 666 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 IRX3P78415 501 aaPredicted RBP6.25□□□□□ -1.41
ATM-224ENST00000534625 MAP3K12Q12852 859 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 HSP90AB4PQ58FF6 505 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 RPAP2Q8IXW5 612 aaPredicted RBP6.25□□□□□ -1.41
ATM-224ENST00000534625 MYLIPQ8WY64 445 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 DPF3Q92784 378 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 KIF1BPQ96EK5 621 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 DEFB118Q96PH6 123 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 DIRC2Q96SL1 478 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 RIOK1Q9BRS2 568 aaKnown RBP6.25□□□□□ -1.41
ATM-224ENST00000534625 ASPNQ9BXN1 380 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 NSUN3Q9H649 340 aaKnown RBP6.25□□□□□ -1.41
ATM-224ENST00000534625 BRMS1Q9HCU9 246 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 TMOD4Q9NZQ9 345 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 RBPJLQ9UBG7 517 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 EBF1Q9UH73 591 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 SERPINB13Q9UIV8 391 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 ZNF281Q9Y2X9 895 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 PLXNB2O15031 1838 aa6.25□□□□□ -1.41
ATM-224ENST00000534625 TCRBV5S4A2TA0A5A2 114 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 NFIBO00712 420 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 RAB11FIP3O75154 756 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 ATE1O95260 518 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 TFRCP02786 760 aaKnown RBP6.24□□□□□ -1.41
ATM-224ENST00000534625 HMGCRP04035 888 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 PDE6AP16499 860 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 GUCY1A2P33402 732 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 SHMT1P34896 483 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 GABPAQ06546 454 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 TTF1Q15361 905 aaPredicted RBP6.24□□□□□ -1.41
ATM-224ENST00000534625 CERKLQ49MI3 558 aaPredicted RBP6.24□□□□□ -1.41
ATM-224ENST00000534625 TIGD5Q53EQ6 642 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 SLC9C2Q5TAH2 1124 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 PHACTR4Q8IZ21 702 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
ATM-224ENST00000534625 GPRC5AQ8NFJ5 357 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 ACER1Q8TDN7 264 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATM-224ENST00000534625 USP6NLQ92738 828 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 EDC3Q96F86 508 aaKnown RBP6.24□□□□□ -1.41
ATM-224ENST00000534625 C12orf42Q96LP6 360 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 PORCNQ9H237 461 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 ADAMTS1Q9UHI8 967 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 RAPGEFL1Q9UHV5 662 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 DDX19BQ9UMR2 479 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 PCDHB14Q9Y5E9 798 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 ZNF532Q9HCE3 1301 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 LAMA3Q16787 3333 aa6.24□□□□□ -1.41
ATM-224ENST00000534625 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 GOLIM4O00461 696 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 HMMRO75330 724 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 CNMDO75829 334 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 IFIT2P09913 472 aaKnown RBP6.23□□□□□ -1.41
ATM-224ENST00000534625 RAC2P15153 192 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 CAPN2P17655 700 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 CYP2B6P20813 491 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 MAPK4P31152 587 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 TEKQ02763 1124 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 RAB3GAP1Q15042 981 aa6.23□□□□□ -1.41
ATM-224ENST00000534625 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
ATM-224ENST00000534625 ABCB5Q2M3G0 1257 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms