RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CSDE1O75534 798 aaKnown RBP23.75■■□□□ 1.39
PKP3-211ENST00000534401 PDIA4P13667 645 aaKnown RBP23.75■■□□□ 1.39
PKP3-211ENST00000534401 CYP11B2P19099 503 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 PTENP60484 403 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 MCPH1Q8NEM0 835 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 SNX29Q8TEQ0 813 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 SAMD11Q96NU1 681 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 ZSCAN16Q9H4T2 348 aaPredicted RBP23.75■■□□□ 1.39
PKP3-211ENST00000534401 MINDY3Q9H8M7 445 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 FOXD4L1Q9NU39 408 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 TMEM161AQ9NX61 479 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 KIAA1024Q9UPX6 916 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 DENND3A2RUS2 1198 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 FOSL2P15408 326 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 FGFR4P22455 802 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 SFPQP23246 707 aaKnown RBP eCLIP23.74■■□□□ 1.39
PKP3-211ENST00000534401 GLRA2P23416 452 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 CDC25AP30304 524 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 PCBP1Q15365 356 aaKnown RBP eCLIP23.74■■□□□ 1.39
PKP3-211ENST00000534401 SF3A1Q15459 793 aaKnown RBP23.74■■□□□ 1.39
PKP3-211ENST00000534401 KRT79Q5XKE5 535 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 PADI6Q6TGC4 694 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 CMTR2Q8IYT2 770 aaKnown RBP23.74■■□□□ 1.39
PKP3-211ENST00000534401 ASAP3Q8TDY4 903 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 AK8Q96MA6 479 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 NLRP4Q96MN2 994 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 SCLT1Q96NL6 688 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 BMP2KQ9NSY1 1161 aaPredicted RBP23.74■■□□□ 1.39
PKP3-211ENST00000534401 DDX19AQ9NUU7 478 aaKnown RBP23.74■■□□□ 1.39
PKP3-211ENST00000534401 ADGRA3Q8IWK6 1321 aa23.74■■□□□ 1.39
PKP3-211ENST00000534401 A0A0U1RQF3 1178 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 USO1O60763 962 aaKnown RBP23.73■■□□□ 1.39
PKP3-211ENST00000534401 EYA4O95677 639 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 SRGAP2CP0DJJ0 459 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 ZSCAN20P17040 1043 aaPredicted RBP23.73■■□□□ 1.39
PKP3-211ENST00000534401 CAPSQ13938 189 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 ZNF598Q86UK7 904 aaKnown RBP23.73■■□□□ 1.39
PKP3-211ENST00000534401 RNF149Q8NC42 400 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 PNMA5Q96PV4 448 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 GAS2L1Q99501 681 aaPredicted RBP23.73■■□□□ 1.39
PKP3-211ENST00000534401 RNF19AQ9NV58 838 aa23.73■■□□□ 1.39
PKP3-211ENST00000534401 VWA3AA6NCI4 1184 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 C5orf67F2Z3F1 127 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 HOXA11P31270 313 aaPredicted RBP23.72■■□□□ 1.39
PKP3-211ENST00000534401 KCNK18Q7Z418 384 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 ECHDC2Q86YB7 292 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 ARNTL2Q8WYA1 636 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 CCDC43Q96MW1 224 aaKnown RBP23.72■■□□□ 1.39
PKP3-211ENST00000534401 C17orf80Q9BSJ5 609 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 CERS4Q9HA82 394 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 AGPAT5Q9NUQ2 364 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 DACT1Q9NYF0 836 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 PCDHB7Q9Y5E2 793 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 CLIC4Q9Y696 253 aa23.72■■□□□ 1.39
PKP3-211ENST00000534401 MYH15Q9Y2K3 1946 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 ARHGEF35A5YM69 484 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 RFXAPO00287 272 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 ZNF623O75123 536 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 EOMESO95936 686 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 ATF7P17544 494 aaPredicted RBP23.71■■□□□ 1.39
PKP3-211ENST00000534401 PHKA2P46019 1235 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 GRB10Q13322 594 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 FAM173BQ6P4H8 233 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 FIBCD1Q8N539 461 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 POLR3FQ9H1D9 316 aaPredicted RBP23.71■■□□□ 1.39
PKP3-211ENST00000534401 BHMT2Q9H2M3 363 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 GPRC5CQ9NQ84 441 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 LMCD1Q9NZU5 365 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 DNM3Q9UQ16 869 aa23.71■■□□□ 1.39
PKP3-211ENST00000534401 COL4A4P53420 1690 aaPredicted RBP23.7■■□□□ 1.39
PKP3-211ENST00000534401 LONP1P36776 959 aaKnown RBP23.7■■□□□ 1.38
PKP3-211ENST00000534401 TFDP1Q14186 410 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 AMHR2Q16671 573 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 TMEM119Q4V9L6 283 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 EPC2Q52LR7 807 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 CATSPER4Q7RTX7 472 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 TMEM192Q8IY95 271 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 SLC17A8Q8NDX2 589 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 MAFAQ8NHW3 353 aaPredicted RBP23.7■■□□□ 1.38
PKP3-211ENST00000534401 MTCH2Q9Y6C9 303 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 KIAA1671Q9BY89 1806 aa23.7■■□□□ 1.38
PKP3-211ENST00000534401 E9PMD0 336 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 RB1P06400 928 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 BMPR1AP36894 532 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 GRIN1Q05586 938 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 BTG3Q14201 252 aaPredicted RBP23.69■■□□□ 1.38
PKP3-211ENST00000534401 CDCA2Q69YH5 1023 aaPredicted RBP23.69■■□□□ 1.38
PKP3-211ENST00000534401 NT5C3AQ9H0P0 336 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 LRFN2Q9ULH4 789 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 RWDD3Q9Y3V2 267 aa23.69■■□□□ 1.38
PKP3-211ENST00000534401 PRUNE2Q8WUY3 3088 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 EYSQ5T1H1 3165 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 H3BNC9 293 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 GATMP50440 423 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 MBTD1Q05BQ5 628 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 FAM102BQ5T8I3 360 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 C1orf186Q6ZWK4 172 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 BSNDQ8WZ55 320 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 USP28Q96RU2 1077 aa23.68■■□□□ 1.38
PKP3-211ENST00000534401 FBXO2Q9UK22 296 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms