RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 SLC15A5A6NIM6 579 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 TBX3O15119 743 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 COBLO75128 1261 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 RGS9O75916 674 aaPredicted RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 OR52Z1P0C646 297 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CPB1P15086 417 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ITGB5P18084 799 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CMA1P23946 247 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 EDNRBP24530 442 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 MAPK4P31152 587 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ZNF76P36508 570 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 AFF1P51825 1210 aaKnown RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 NRLP54845 237 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 KCTD2Q14681 263 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PWP2Q15269 919 aaKnown RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CALCRLQ16602 461 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ZNF792Q3KQV3 632 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CEP55Q53EZ4 464 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PRR16Q569H4 304 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ARHGEF16Q5VV41 709 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 SHC4Q6S5L8 630 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 GPR142Q7Z601 462 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PLEKHH3Q7Z736 793 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PLA2G4DQ86XP0 818 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CCAR1Q8IX12 1150 aaKnown RBP6.91□□□□□ -1.3
CMTM1-220ENST00000534143 ETNPPLQ8TBG4 499 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 MORC4Q8TE76 937 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 FAM20AQ96MK3 541 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 IWS1Q96ST2 819 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 CSRNP2Q9H175 543 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 SEPT3Q9UH03 358 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 MCM3APO60318 1980 aa6.91□□□□□ -1.3
CMTM1-220ENST00000534143 MSH4O15457 936 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 STAM2O75886 525 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 MBD3O95983 291 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 PGK2P07205 417 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 ARP10275 920 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 MYCLP12524 364 aaPredicted RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 LIG1P18858 919 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 ADORA2AP29274 412 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 CTGFP29279 349 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 CCND2P30279 289 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 ICAM3P32942 547 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 LONP1P36776 959 aaKnown RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 MRE11P49959 708 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 GRB14Q14449 540 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 PDIA5Q14554 519 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 PERM1Q5SV97 790 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 WDR78Q5VTH9 848 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 RESP18Q5W5W9 173 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 DTHD1Q6ZMT9 781 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 USP49Q70CQ1 688 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 FSIP1Q8NA03 581 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 ENGASEQ8NFI3 743 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 TTC9Q92623 222 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 USP6NLQ92738 828 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 SLC5A5Q92911 643 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 INPP4AQ96PE3 977 aaPredicted RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 WDR11Q9BZH6 1224 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 CCSER1Q9C0I3 900 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 GOLPH3LQ9H4A5 285 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 RNF186Q9NXI6 227 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 ADD3Q9UEY8 706 aaKnown RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 GJD2Q9UKL4 321 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 HPSEQ9Y251 543 aa6.9□□□□□ -1.3
CMTM1-220ENST00000534143 DIS3Q9Y2L1 958 aaKnown RBP6.9□□□□□ -1.3
CMTM1-220ENST00000534143 WDR81Q562E7 1941 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 A0A0A0MRY4 1105 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 VWA3AA6NCI4 1184 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 GOLGA6L4A6NEF3 574 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 CCDC85CA6NKD9 419 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 B4DLN1 442 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 ZBTB39O15060 712 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 MAFGO15525 162 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 DHX15O43143 795 aaKnown RBP6.89□□□□□ -1.31
CMTM1-220ENST00000534143 MMP20O60882 483 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 EIF3JO75822 258 aaKnown RBP6.89□□□□□ -1.31
CMTM1-220ENST00000534143 PSMD10O75832 226 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 TBC1D8O95759 1140 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 IGHA2P01877 340 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 PSAPP07602 524 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 HOXC6P09630 235 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 TXKP42681 527 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
CMTM1-220ENST00000534143 MLLT1Q03111 559 aaPredicted RBP6.89□□□□□ -1.31
CMTM1-220ENST00000534143 PLAURQ03405 335 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 SPIRE1Q08AE8 756 aa6.89□□□□□ -1.31
CMTM1-220ENST00000534143 SNW1Q13573 536 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms