RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 LINS1Q8NG48 757 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 RNF141Q8WVD5 230 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 DNAAF4Q8WXU2 420 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 SUCLG2Q96I99 432 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 APBA2Q99767 749 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 IDI2Q9BXS1 227 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 GZF1Q9H116 711 aaPredicted RBP3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 SP110Q9HB58 689 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 BTBD7Q9P203 1132 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 KLHL3Q9UH77 587 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 CORINQ9Y5Q5 1042 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 IRAK3Q9Y616 596 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 PSME4Q14997 1843 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 TRANK1O15050 2925 aa3.71□□□□□ -1.82
CHMP4A-208ENST00000534106 SPTBN4Q9H254 2564 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 KBTBD13C9JR72 458 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ERC2O15083 957 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ENTPD3O75355 529 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 PDE8BO95263 885 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 P4HBP07237 508 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 NBPF7P0C2Y1 421 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 RLBP1P12271 317 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 CYBAP13498 195 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 TFE3P19532 575 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 PI3P19957 117 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 FGFR2P21802 821 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 HOXA7P31268 230 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 GBP1P32455 592 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 CYP2C18P33260 490 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ZEB1P37275 1124 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 BACE1P56817 501 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 GNAI1P63096 354 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ZYXQ15942 572 aaKnown RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 TMCO4Q5TGY1 634 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 OTOP2Q7RTS6 562 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ANKRD44Q8N8A2 993 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 VGLL2Q8N8G2 317 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 SLC44A5Q8NCS7 719 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ZNF384Q8TF68 577 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 SOCS4Q8WXH5 440 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 KCNC2Q96PR1 638 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 GCM1Q9NP62 436 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 IFT57Q9NWB7 429 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 TLR6Q9Y2C9 796 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 MTCH2Q9Y6C9 303 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 AK5Q9Y6K8 562 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 RPAP1Q9BWH6 1393 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 MYO9BQ13459 2157 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 ZFHX4Q86UP3 3567 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 PTPRZ1P23471 2315 aaPredicted RBP3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 UTYO14607 1347 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 UMODL1Q5DID0 1318 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 MROH5Q6ZUA9 1318 aa3.7□□□□□ -1.82
CHMP4A-208ENST00000534106 A0A1W2PQ45 241 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 A0A1W2PQY0 241 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 MYADML2A6NDP7 307 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SLC15A5A6NIM6 579 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 GRM8O00222 908 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SEPT4O43236 478 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 TRIM13O60858 407 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 KRT37O76014 449 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 TIMP1P01033 207 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 ADORA1P30542 326 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 BTDP43251 543 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 PHKA1P46020 1223 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 AFF3P51826 1226 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 RHBDL3P58872 404 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 TEKQ02763 1124 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 PABPC4Q13310 644 aaKnown RBP eCLIP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SSPNQ14714 243 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 VMACQ2NL98 169 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 TWISTNBQ3B726 338 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 OLFML2BQ68BL8 750 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 MFSD5Q6N075 450 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 CEP128Q6ZU80 1094 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 DPP9Q86TI2 863 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 ZDHHC14Q8IZN3 488 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 WDR66Q8TBY9 1149 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 ACER1Q8TDN7 264 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 PANK1Q8TE04 598 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 VWCEQ96DN2 955 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SIGLEC10Q96LC7 697 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 CCDC74BQ96LY2 380 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 KREMEN1Q96MU8 473 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 ASPNQ9BXN1 380 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 STK31Q9BXU1 1019 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 BICC1Q9H694 974 aaKnown RBP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 MYH16Q9H6N6 1097 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SLC28A3Q9HAS3 691 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 C9orf78Q9NZ63 289 aaPredicted RBP3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 TMOD4Q9NZQ9 345 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 MSRAQ9UJ68 235 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 SUGT1Q9Y2Z0 365 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 IVNS1ABPQ9Y6Y0 642 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 MYO15AQ9UKN7 3530 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 ZDBF2Q9HCK1 2354 aa3.69□□□□□ -1.82
CHMP4A-208ENST00000534106 CHD8Q9HCK8 2581 aa3.68□□□□□ -1.82
CHMP4A-208ENST00000534106 DLG5Q8TDM6 1919 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms