RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 THNSL1Q8IYQ7 743 aa21.19■□□□□ 0.98
LRRK1-210ENST00000534045 PRPF31Q8WWY3 499 aaKnown RBP21.19■□□□□ 0.98
LRRK1-210ENST00000534045 TMEM143Q96AN5 459 aa21.19■□□□□ 0.98
LRRK1-210ENST00000534045 TMEM117Q9H0C3 514 aa21.19■□□□□ 0.98
LRRK1-210ENST00000534045 BMP2KQ9NSY1 1161 aaPredicted RBP21.19■□□□□ 0.98
LRRK1-210ENST00000534045 TYW1Q9NV66 732 aaKnown RBP21.19■□□□□ 0.98
LRRK1-210ENST00000534045 WRAP73Q9P2S5 460 aaPredicted RBP21.19■□□□□ 0.98
LRRK1-210ENST00000534045 NOL7Q9UMY1 257 aaKnown RBP21.19■□□□□ 0.98
LRRK1-210ENST00000534045 ARID2Q68CP9 1835 aa21.19■□□□□ 0.98
LRRK1-210ENST00000534045 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.18■□□□□ 0.98
LRRK1-210ENST00000534045 A0A0U1RQF3 1178 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 ASAP2O43150 1006 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 LINC00271P0C7V0 271 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 SKIP12755 728 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 SPIRE1Q08AE8 756 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 ZNF579Q8NAF0 562 aaKnown RBP21.18■□□□□ 0.98
LRRK1-210ENST00000534045 FBXO18Q8NFZ0 1043 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 PABPC5Q96DU9 382 aaKnown RBP21.18■□□□□ 0.98
LRRK1-210ENST00000534045 KIF2CQ99661 725 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 MTRQ99707 1265 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 IGFLR1Q9H665 355 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 DHX33Q9H6R0 707 aaKnown RBP21.18■□□□□ 0.98
LRRK1-210ENST00000534045 CLDND1Q9NY35 253 aa21.18■□□□□ 0.98
LRRK1-210ENST00000534045 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
LRRK1-210ENST00000534045 ITGB1P05556 798 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 LAG3P18627 525 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 NCBP1Q09161 790 aaKnown RBP21.17■□□□□ 0.98
LRRK1-210ENST00000534045 EMC2Q15006 297 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 ZNF174Q15697 407 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 PUS10Q3MIT2 529 aaKnown RBP21.17■□□□□ 0.98
LRRK1-210ENST00000534045 SPPL3Q8TCT6 385 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 POF1BQ8WVV4 589 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 MTMR9Q96QG7 549 aa21.17■□□□□ 0.98
LRRK1-210ENST00000534045 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
LRRK1-210ENST00000534045 ZBTB39O15060 712 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 LEXMQ3ZCV2 418 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 SRGAP1Q7Z6B7 1085 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 ERMNQ8TAM6 284 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 NECAB3Q96P71 396 aaPredicted RBP21.16■□□□□ 0.98
LRRK1-210ENST00000534045 HSD17B14Q9BPX1 270 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 ANKEF1Q9NU02 776 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 FAM50BQ9Y247 325 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 ATG2AQ2TAZ0 1938 aa21.16■□□□□ 0.98
LRRK1-210ENST00000534045 H3BQ06 376 aaPredicted RBP21.15■□□□□ 0.98
LRRK1-210ENST00000534045 TECP42680 631 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 KRT17Q04695 432 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 UBE3AQ05086 875 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 LAMTOR4Q0VGL1 99 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 ORC2Q13416 577 aaPredicted RBP21.15■□□□□ 0.98
LRRK1-210ENST00000534045 TFDP1Q14186 410 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 MXD4Q14582 209 aaPredicted RBP21.15■□□□□ 0.98
LRRK1-210ENST00000534045 NOSTRINQ8IVI9 506 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 LRRC43Q8N309 656 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 RNF149Q8NC42 400 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 CASD1Q96PB1 797 aa21.15■□□□□ 0.98
LRRK1-210ENST00000534045 FNDC1Q4ZHG4 1894 aaPredicted RBP21.15■□□□□ 0.98
LRRK1-210ENST00000534045 DGAT1O75907 488 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 FGF18O76093 207 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 LYPLA2O95372 231 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 OR52Z1P0C646 297 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 XRCC6P12956 609 aaKnown RBP eCLIP21.14■□□□□ 0.97
LRRK1-210ENST00000534045 PHKA2P46019 1235 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 TTC38Q5R3I4 469 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 PTCRAQ6ISU1 281 aaPredicted RBP21.14■□□□□ 0.97
LRRK1-210ENST00000534045 COLGALT1Q8NBJ5 622 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 PGBD4Q96DM1 585 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 MRPL9Q9BYD2 267 aaKnown RBP21.14■□□□□ 0.97
LRRK1-210ENST00000534045 TMEM60Q9H2L4 133 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 REV3LO60673 3130 aa21.14■□□□□ 0.97
LRRK1-210ENST00000534045 POTEMA6NI47 508 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 WNT7AO00755 349 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 ERLIN2O94905 339 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 TRAPPC10P48553 1259 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 RAB27AP51159 221 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 FERMT3Q86UX7 667 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 HELQQ8TDG4 1101 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 PIGOQ8TEQ8 1089 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 ZNF558Q96NG5 402 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
LRRK1-210ENST00000534045 PPM1AP35813 382 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 ALDH7A1P49419 539 aaKnown RBP21.12■□□□□ 0.97
LRRK1-210ENST00000534045 MCM2P49736 904 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 HYAL1Q12794 435 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 LONRF3Q496Y0 759 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 KCNT2Q6UVM3 1135 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 GLB1LQ6UWU2 654 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 RBM23Q86U06 439 aaKnown RBP21.12■□□□□ 0.97
LRRK1-210ENST00000534045 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.12■□□□□ 0.97
LRRK1-210ENST00000534045 RSPH1Q8WYR4 309 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 NACC1Q96RE7 527 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 CWH43Q9H720 699 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 TLE6Q9H808 572 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 TUFT1Q9NNX1 390 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 TLR9Q9NR96 1032 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 FAM105AQ9NUU6 356 aa21.12■□□□□ 0.97
LRRK1-210ENST00000534045 BRWD1Q9NSI6 2320 aa21.11■□□□□ 0.97
LRRK1-210ENST00000534045 TCF20Q9UGU0 1960 aaKnown RBP21.11■□□□□ 0.97
LRRK1-210ENST00000534045 H3BQV1 296 aa21.11■□□□□ 0.97
LRRK1-210ENST00000534045 DNAJB1P25685 340 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms