RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TAF7L	Q5H9L4	462 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	CREB3L3	Q68CJ9	461 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	TMED8	Q6PL24	325 aa	Predicted RBP	6.18	□□□□□ -1.42
ATM-223	ENST00000533979	KANSL1	Q7Z3B3	1105 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	BMP8A	Q7Z5Y6	402 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	PHYKPL	Q8IUZ5	450 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	FMNL3	Q8IVF7	1028 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	NIM1K	Q8IY84	436 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	RPGR	Q92834	1020 aa	Known RBP	6.18	□□□□□ -1.42
ATM-223	ENST00000533979	FEZ1	Q99689	392 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	PLA2G3	Q9NZ20	509 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	SYNPO2	Q9UMS6	1093 aa		6.18	□□□□□ -1.42
ATM-223	ENST00000533979	PLSCR1	O15162	318 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	SLC26A4	O43511	780 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	VIL1	P09327	827 aa	Known RBP	6.17	□□□□□ -1.42
ATM-223	ENST00000533979	SCNN1B	P51168	640 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	TBX4	P57082	545 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	ZXDA	P98168	799 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	DSG1	Q02413	1049 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	FOXL1	Q12952	345 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	GRM7	Q14831	915 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	DALRD3	Q5D0E6	543 aa	Known RBP	6.17	□□□□□ -1.42
ATM-223	ENST00000533979	ODR4	Q5SWX8	454 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	CNNM4	Q6P4Q7	775 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	ADGRE4P	Q86SQ3	457 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	PALM2	Q8IXS6	379 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	CCDC146	Q8IYE0	955 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	GPR135	Q8IZ08	494 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	NXPE1	Q8N323	547 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	NKD2	Q969F2	451 aa	Predicted RBP	6.17	□□□□□ -1.42
ATM-223	ENST00000533979	FAM89A	Q96GI7	184 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	ADO	Q96SZ5	270 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	KRTAP4-5	Q9BYR2	181 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	TMPRSS5	Q9H3S3	457 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	PLAA	Q9Y263	795 aa		6.17	□□□□□ -1.42
ATM-223	ENST00000533979	C2orf78	A6NCI8	922 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	DAPK3	O43293	454 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	ACO1	P21399	889 aa	Known RBP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	SMAD3	P84022	425 aa	Known RBP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	ATP2C1	P98194	919 aa	Predicted RBP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	ADCY2	Q08462	1091 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	EFHB	Q8N7U6	833 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	PRPF38A	Q8NAV1	312 aa	Known RBP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	OR14K1	Q8NGZ2	314 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	PMM1	Q92871	262 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	OR14A2	Q96R54	314 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	MPHOSPH9	Q99550	1183 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	OSBPL6	Q9BZF3	934 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	AGO3	Q9H9G7	860 aa	Known RBP	6.16	□□□□□ -1.42
ATM-223	ENST00000533979	PRDM16	Q9HAZ2	1276 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	TOMM22	Q9NS69	142 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979	MAGEL2	Q9UJ55	1249 aa		6.16	□□□□□ -1.42
ATM-223	ENST00000533979		A0A0A6YYJ9	748 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	KPNA6	O60684	536 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	PRPF6	O94906	941 aa	Known RBP	6.15	□□□□□ -1.42
ATM-223	ENST00000533979	AMH	P03971	560 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	MYBPC3	Q14896	1274 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	PRAMEF9	Q5VWM5	478 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	CCAR1	Q8IX12	1150 aa	Known RBP	6.15	□□□□□ -1.42
ATM-223	ENST00000533979	SMC5	Q8IY18	1101 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	PPM1K	Q8N3J5	372 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	PLA2G15	Q8NCC3	412 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	SHCBP1	Q8NEM2	672 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	GCDH	Q92947	438 aa	Predicted RBP	6.15	□□□□□ -1.42
ATM-223	ENST00000533979	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.15	□□□□□ -1.42
ATM-223	ENST00000533979	PITHD1	Q9GZP4	211 aa	Predicted RBP	6.15	□□□□□ -1.42
ATM-223	ENST00000533979	HAPLN2	Q9GZV7	340 aa		6.15	□□□□□ -1.42
ATM-223	ENST00000533979	EIF3J	O75822	258 aa	Known RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	CD40	P25942	277 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	KPNA1	P52294	538 aa	Predicted RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	OCRL	Q01968	901 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	HHEX	Q03014	270 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	FOXE3	Q13461	319 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	MAN2A1	Q16706	1144 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	SPDYA	Q5MJ70	313 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	GPR158	Q5T848	1215 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	ESRP1	Q6NXG1	681 aa	Known RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	KRT26	Q7Z3Y9	468 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	OR5AN1	Q8NGI8	311 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	CHTF18	Q8WVB6	975 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	RTF1	Q92541	710 aa	Known RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	DYDC2	Q96IM9	177 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	WDR92	Q96MX6	357 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF747	Q9BV97	191 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	HOMER2	Q9NSB8	354 aa		6.14	□□□□□ -1.43
ATM-223	ENST00000533979	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	USP36	Q9P275	1121 aa	Known RBP	6.14	□□□□□ -1.43
ATM-223	ENST00000533979	TGM5	O43548	720 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	PRC1	O43663	620 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	HIBADH	P31937	336 aa	Known RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	SART3	Q15020	963 aa	Known RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	GAGE13	Q4V321	117 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	KIAA1841	Q6NSI8	718 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	CRIP3	Q6Q6R5	217 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	CLEC14A	Q86T13	490 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	C7orf31	Q8N865	590 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	SMC1B	Q8NDV3	1235 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	MFSD3	Q96ES6	412 aa		6.13	□□□□□ -1.43

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