RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 RUSC1Q9BVN2 902 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 PANK2Q9BZ23 570 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
CMTM1-219ENST00000533953 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 USP20Q9Y2K6 914 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 LAMA2P24043 3122 aaKnown RBP14.88□□□□□ -0.03
CMTM1-219ENST00000533953 SZT2Q5T011 3432 aa14.88□□□□□ -0.03
CMTM1-219ENST00000533953 NPHP3-ACAD11A0A0J9YXS1 232 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 EYA4O95677 639 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 UBA7P41226 1012 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 STK38Q15208 465 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 LONRF3Q496Y0 759 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 TMEM119Q4V9L6 283 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 GPR153Q6NV75 609 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 ZNF410Q86VK4 478 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 EXOC8Q8IYI6 725 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 MYLIPQ8WY64 445 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 FTHL17Q9BXU8 183 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 RGS18Q9NS28 235 aa14.87□□□□□ -0.03
CMTM1-219ENST00000533953 SRPRBQ9Y5M8 271 aaKnown RBP14.87□□□□□ -0.03
CMTM1-219ENST00000533953 SFI1A8K8P3 1242 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 C9IYK1 514 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 ASAP2O43150 1006 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 FGFR1P11362 822 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 MUTP22033 750 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 LONP1P36776 959 aaKnown RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 HTRA4P83105 476 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 DNM1Q05193 864 aaKnown RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 BECN1Q14457 450 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 PAN2Q504Q3 1202 aaKnown RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 HYIQ5T013 277 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 RINT1Q6NUQ1 792 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 CRIPAKQ8N1N5 446 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 RNF169Q8NCN4 708 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 LINC00301Q8NCQ3 95 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 ARNTL2Q8WYA1 636 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 CDK5RAP3Q96JB5 506 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
CMTM1-219ENST00000533953 YME1L1Q96TA2 773 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 KIFC3Q9BVG8 833 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 INSL6Q9Y581 213 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 STK24Q9Y6E0 443 aa14.86□□□□□ -0.03
CMTM1-219ENST00000533953 LINC01553A4QN01 128 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 INO80B-WBP1J3KQ70 363 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 GAS2O43903 313 aaKnown RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 BRD1O95696 1058 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 PLA2G4BP0C869 781 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 LIG1P18858 919 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 PLCG1P19174 1290 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 SARSP49591 514 aaKnown RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 PTENP60484 403 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 CDC42EP1Q00587 391 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 MCM6Q14566 821 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 MXD4Q14582 209 aaPredicted RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 SLC24A5Q71RS6 500 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 DAW1Q8N136 415 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 MCPH1Q8NEM0 835 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 RASSF8Q8NHQ8 419 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 CPB2Q96IY4 423 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 AK8Q96MA6 479 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 C17orf80Q9BSJ5 609 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 INO80BQ9C086 356 aaPredicted RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 BLOC1S4Q9NUP1 217 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 HCSTQ9UBK5 93 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 PIN4Q9Y237 131 aaKnown RBP14.85□□□□□ -0.03
CMTM1-219ENST00000533953 PTPRSQ13332 1948 aa14.85□□□□□ -0.03
CMTM1-219ENST00000533953 A0A087X0B3 334 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 TTLL13PA6NNM8 815 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 SPTLC2O15270 562 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 B4GALT5O43286 388 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 HIP1RO75146 1068 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 DGKIO75912 1065 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
CMTM1-219ENST00000533953 SFPQP23246 707 aaKnown RBP eCLIP14.84□□□□□ -0.03
CMTM1-219ENST00000533953 HOXA11P31270 313 aaPredicted RBP14.84□□□□□ -0.03
CMTM1-219ENST00000533953 PHKA2P46019 1235 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 SLC12A3P55017 1021 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 FAM189BP81408 668 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 MBTD1Q05BQ5 628 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 TFDP1Q14186 410 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 ADGRE1Q14246 886 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 ARSHQ5FYA8 562 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 ODR4Q5SWX8 454 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 CDR2LQ86X02 465 aaPredicted RBP14.84□□□□□ -0.03
CMTM1-219ENST00000533953 NPAS4Q8IUM7 802 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 ZNF710Q8N1W2 664 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 KRI1Q8N9T8 703 aaKnown RBP14.84□□□□□ -0.03
CMTM1-219ENST00000533953 LPPQ93052 612 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 LRFN2Q9ULH4 789 aa14.84□□□□□ -0.03
CMTM1-219ENST00000533953 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms