RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MYO3BQ8WXR4 1341 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 NHSQ6T4R5 1651 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 BTNL10A8MVZ5 291 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 F8VZ95 297 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 SOX5P35711 763 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 FNTAP49354 379 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 UBAP2Q5T6F2 1119 aaKnown RBP20.94■□□□□ 0.94
CAPN1-226ENST00000533820 ARFGAP2Q8N6H7 521 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 CERKQ8TCT0 537 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 THOC1Q96FV9 657 aaKnown RBP20.94■□□□□ 0.94
CAPN1-226ENST00000533820 SH2D3AQ9BRG2 576 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 COA1Q9GZY4 146 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 PCIF1Q9H4Z3 704 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 DDX20Q9UHI6 824 aaKnown RBP20.94■□□□□ 0.94
CAPN1-226ENST00000533820 STXBP5LQ9Y2K9 1186 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 TISP43B9A030 160 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 DDX39AO00148 427 aaKnown RBP20.93■□□□□ 0.94
CAPN1-226ENST00000533820 NDUFB10O96000 172 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 FERP16591 822 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 CRKP46108 304 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 ZNF513Q8N8E2 541 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-226ENST00000533820 RAPGEF5Q92565 580 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 HOOK2Q96ED9 719 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 SLC12A6Q9UHW9 1150 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 PNMA2Q9UL42 364 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 GOLGA6L7A0A1B0GV03 622 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 AP1G2O75843 785 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 PSMC2P35998 433 aaKnown RBP20.93■□□□□ 0.94
CAPN1-226ENST00000533820 PEX19P40855 299 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 PPP2R2AP63151 447 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 FMNL3Q8IVF7 1028 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 VAV3Q9UKW4 847 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC188H7C350 402 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 TNFAIP3P21580 790 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 HOXA7P31268 230 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-226ENST00000533820 FMO5P49326 533 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 IRX1P78414 480 aaPredicted RBP20.93■□□□□ 0.94
CAPN1-226ENST00000533820 JAG1P78504 1218 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC121Q6ZUS5 278 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 SYCE1Q8N0S2 351 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 SLC20A1Q8WUM9 679 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 ALG3Q92685 438 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 HES6Q96HZ4 224 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 FMO2Q99518 471 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 BTAF1O14981 1849 aa20.93■□□□□ 0.94
CAPN1-226ENST00000533820 SLCO1A2P46721 670 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 MARCKSL1P49006 195 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 VPS72Q15906 364 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 AP1ARQ63HQ0 302 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 LRIG3Q6UXM1 1119 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 CEP57Q86XR8 500 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC13Q8IYE1 715 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 SELENOSQ9BQE4 189 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 PPP1R12BO60237 982 aaPredicted RBP20.92■□□□□ 0.94
CAPN1-226ENST00000533820 DR1Q01658 176 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 AP3B2Q13367 1082 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC174Q6PII3 467 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 CPLX4Q7Z7G2 160 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 SLFN11Q7Z7L1 901 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 SYCP3Q8IZU3 236 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 ELMO3Q96BJ8 720 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC114Q96M63 670 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 COG5Q9UP83 839 aa20.92■□□□□ 0.94
CAPN1-226ENST00000533820 OPLAHO14841 1288 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 CLNS1AP54105 237 aaKnown RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ODR4Q5SWX8 454 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 FAM178BQ8IXR5 827 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 CRYGNQ8WXF5 182 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ACP6Q9NPH0 428 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 FOXN3O00409 490 aaPredicted RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 CES2O00748 559 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ATMINO43313 823 aaPredicted RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 EYA4O95677 639 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 SYDE2Q5VT97 1194 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 SH3BP5LQ7L8J4 393 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 RFFLQ8WZ73 363 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 C18orf8Q96DM3 657 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 MBOAT7Q96N66 472 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 GLT8D2Q9H1C3 349 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ZMYM2Q9UBW7 1377 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 EXOC3O60645 756 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 GH2P01242 217 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 SREBF1P36956 1147 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 ZYXQ15942 572 aaKnown RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 INTS2Q9H0H0 1204 aaKnown RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 CCDC113Q9H0I3 377 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 SLITRK6Q9H5Y7 841 aa20.91■□□□□ 0.94
CAPN1-226ENST00000533820 AHDC1Q5TGY3 1603 aaPredicted RBP20.91■□□□□ 0.94
CAPN1-226ENST00000533820 UBAP1LF5GYI3 381 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 CPNE8Q86YQ8 564 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 KRT35Q92764 455 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 WDR18Q9BV38 432 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 CTTNBP2NLQ9P2B4 639 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 USP21Q9UK80 565 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 TRAPPC3O43617 180 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 SLITRK3O94933 977 aa20.9■□□□□ 0.94
CAPN1-226ENST00000533820 Q4G0T1 1027 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms