RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 PPP1R16BQ96T49 567 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 CCDC169A6NNP5 214 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 CKBP12277 381 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 CDC42EP1Q00587 391 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 RBL2Q08999 1139 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
COMMD9-208ENST00000533643 TFDP1Q14186 410 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 KCNB1Q14721 858 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 SYAP1Q96A49 352 aaPredicted RBP13.16□□□□□ -0.3
COMMD9-208ENST00000533643 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
COMMD9-208ENST00000533643 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 EXOC1Q9NV70 894 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 TBX21Q9UL17 535 aa13.16□□□□□ -0.3
COMMD9-208ENST00000533643 ADGRA3Q8IWK6 1321 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 EVPLQ92817 2033 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 A0A087WZ62 844 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 SLC16A4O15374 487 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CAND2O75155 1236 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CHRNA1P02708 482 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CLTBP09497 229 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CTSHP09668 335 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 MAPTP10636 758 aaKnown RBP13.15□□□□□ -0.3
COMMD9-208ENST00000533643 NMT1P30419 496 aaKnown RBP13.15□□□□□ -0.3
COMMD9-208ENST00000533643 NAMPTP43490 491 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 SMTNP53814 917 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 PTENP60484 403 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 MGAT3Q09327 533 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 PSMD2Q13200 908 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 BFSP2Q13515 415 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 FAM26DQ5JW98 314 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 ZNF410Q86VK4 478 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 TMEM161BQ8NDZ6 487 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
COMMD9-208ENST00000533643 NLRP4Q96MN2 994 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 FDXACB1Q9BRP7 624 aaPredicted RBP13.15□□□□□ -0.3
COMMD9-208ENST00000533643 KIFC3Q9BVG8 833 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
COMMD9-208ENST00000533643 OLFML3Q9NRN5 406 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 CDY2AQ9Y6F7 541 aa13.15□□□□□ -0.3
COMMD9-208ENST00000533643 BIN1O00499 593 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 BMP6P22004 513 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 PHKA2P46019 1235 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
COMMD9-208ENST00000533643 NCKAP1LP55160 1127 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 STK4Q13043 487 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 MORC3Q14149 939 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
COMMD9-208ENST00000533643 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 ZNF720Q7Z2F6 126 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 HAUS6Q7Z4H7 955 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
COMMD9-208ENST00000533643 GLIS3Q8NEA6 775 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 OSMRQ99650 979 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 NFKBIZQ9BYH8 718 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 ST6GALNAC4Q9H4F1 302 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 MINDY3Q9H8M7 445 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 MRPL44Q9H9J2 332 aaKnown RBP13.14□□□□□ -0.31
COMMD9-208ENST00000533643 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 ARHGAP28Q9P2N2 729 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 TRPV2Q9Y5S1 764 aa13.14□□□□□ -0.31
COMMD9-208ENST00000533643 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 TRIM43BA6NCK2 446 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 RBAK-RBAKDNI3L0D1 243 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 K7ENM7 598 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms