RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 YWHABP31946 246 aaKnown RBP17.27■□□□□ 0.36
CPSF1-211ENST00000533492 IRS1P35568 1242 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 RFC5P40937 340 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CYP4A11Q02928 519 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CTC1Q2NKJ3 1217 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 XKR9Q5GH70 373 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 TWF2Q6IBS0 349 aaKnown RBP17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 KSR1Q8IVT5 923 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CASD1Q96PB1 797 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 CWH43Q9H720 699 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 WRAP73Q9P2S5 460 aaPredicted RBP17.27■□□□□ 0.36
CPSF1-211ENST00000533492 COL4A3BPQ9Y5P4 624 aa17.27■□□□□ 0.36
CPSF1-211ENST00000533492 NEMFO60524 1076 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 FGF18O76093 207 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 SKIP12755 728 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 SSTR3P32745 418 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 LTBRP36941 435 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 TXKP42681 527 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 GUCY1B3Q02153 619 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
CPSF1-211ENST00000533492 MUC3AQ02505 3323 aa17.26■□□□□ 0.35
CPSF1-211ENST00000533492 ASAP2O43150 1006 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
CPSF1-211ENST00000533492 SLITRK3O94933 977 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 NRIP1P48552 1158 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 NDUFV1P49821 464 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ST3GAL1Q11201 340 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ADAM15Q13444 863 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 CLUL1Q15846 466 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
CPSF1-211ENST00000533492 GJD3Q8N144 294 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 HELQQ8TDG4 1101 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
CPSF1-211ENST00000533492 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ZNF558Q96NG5 402 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
CPSF1-211ENST00000533492 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
CPSF1-211ENST00000533492 C1QTNF1Q9BXJ1 281 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 TLE6Q9H808 572 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 TLR9Q9NR96 1032 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ATG2AQ2TAZ0 1938 aa17.25■□□□□ 0.35
CPSF1-211ENST00000533492 ZBTB39O15060 712 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 LINC01565O15544 149 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 PHKA2P46019 1235 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 KRT17Q04695 432 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
CPSF1-211ENST00000533492 EMC2Q15006 297 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 CLLU1OSQ5K130 101 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 PDE12Q6L8Q7 609 aaKnown RBP17.24■□□□□ 0.35
CPSF1-211ENST00000533492 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 ZNF598Q86UK7 904 aaKnown RBP17.24■□□□□ 0.35
CPSF1-211ENST00000533492 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 CCDC43Q96MW1 224 aaKnown RBP17.24■□□□□ 0.35
CPSF1-211ENST00000533492 MTRQ99707 1265 aa17.24■□□□□ 0.35
CPSF1-211ENST00000533492 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
CPSF1-211ENST00000533492 PLXNA4Q9HCM2 1894 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 MCM7P33993 719 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 PPM1AP35813 382 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
CPSF1-211ENST00000533492 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
CPSF1-211ENST00000533492 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 EFHBQ8N7U6 833 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CPSF1-211ENST00000533492 HSD17B14Q9BPX1 270 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 IFT122Q9HBG6 1241 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 SH2B1Q9NRF2 756 aaPredicted RBP17.23■□□□□ 0.35
CPSF1-211ENST00000533492 SPG21Q9NZD8 308 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 CD207Q9UJ71 328 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 LZTS1Q9Y250 596 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
CPSF1-211ENST00000533492 WNT7AO00755 349 aa17.22■□□□□ 0.35
CPSF1-211ENST00000533492 TBX10O75333 385 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms