RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 OSBPL7Q9BZF2 842 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 C2orf40Q9H1Z8 148 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 DACT1Q9NYF0 836 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 PCDHA11Q9Y5I1 949 aa23.24■■□□□ 1.31
VPS51-211ENST00000533487 MYH11P35749 1972 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 A0A087WWV3 80 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 PLA2G4BP0C869 781 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 ZSCAN20P17040 1043 aaPredicted RBP23.23■■□□□ 1.31
VPS51-211ENST00000533487 PLCG1P19174 1290 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 SCP2P22307 547 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 KARSQ15046 597 aaKnown RBP23.23■■□□□ 1.31
VPS51-211ENST00000533487 FAM102BQ5T8I3 360 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 C1orf186Q6ZWK4 172 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 KCNK18Q7Z418 384 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 HERC6Q8IVU3 1022 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 TOP1MTQ969P6 601 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 EPSTI1Q96J88 318 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 IFT74Q96LB3 600 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 CLIC6Q96NY7 704 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 MSRAQ9UJ68 235 aa23.23■■□□□ 1.31
VPS51-211ENST00000533487 GBF1Q92538 1859 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 ENPP3O14638 875 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 GJB5O95377 273 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 SRGAP2CP0DJJ0 459 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 GLRA2P23416 452 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 AXLP30530 894 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 NAMPTP43490 491 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 ME1P48163 572 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 SLC12A3P55017 1021 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 NCBP1Q09161 790 aaKnown RBP23.22■■□□□ 1.31
VPS51-211ENST00000533487 TCTN1Q2MV58 587 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 RRAGBQ5VZM2 374 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 LARP4BQ92615 738 aaKnown RBP23.22■■□□□ 1.31
VPS51-211ENST00000533487 RAD54LQ92698 747 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 PPP1R16BQ96T49 567 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 TRAIPQ9BWF2 469 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 CUEDC2Q9H467 287 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 RGS18Q9NS28 235 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 BMP2KQ9NSY1 1161 aaPredicted RBP23.22■■□□□ 1.31
VPS51-211ENST00000533487 ODF2LQ9ULJ1 636 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 COL4A6Q14031 1691 aa23.22■■□□□ 1.31
VPS51-211ENST00000533487 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.21■■□□□ 1.31
VPS51-211ENST00000533487 DENND3A2RUS2 1198 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 FXR1P51114 621 aaKnown RBP eCLIP23.21■■□□□ 1.31
VPS51-211ENST00000533487 CAPSQ13938 189 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 SLC24A5Q71RS6 500 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 KSR1Q8IVT5 923 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 ZBTB8OSQ8IWT0 167 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 RSPH1Q8WYR4 309 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 SPATA32Q96LK8 384 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 PRIMPOLQ96LW4 560 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 TMX1Q9H3N1 280 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 BLOC1S4Q9NUP1 217 aa23.21■■□□□ 1.31
VPS51-211ENST00000533487 SKIP12755 728 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 EFNA5P52803 228 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 DSC3Q14574 896 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 FOXD4L6Q3SYB3 417 aaPredicted RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 AXDND1Q5T1B0 1012 aaPredicted RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 CDCA2Q69YH5 1023 aaPredicted RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 FOXD4L3Q6VB84 417 aaPredicted RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 CATSPER4Q7RTX7 472 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 ASAP3Q8TDY4 903 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 LEO1Q8WVC0 666 aaPredicted RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 CCDC51Q96ER9 411 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 RAD9AQ99638 391 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 ELAC1Q9H777 363 aaKnown RBP23.2■■□□□ 1.3
VPS51-211ENST00000533487 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 PCDHA7Q9UN72 937 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 INSL6Q9Y581 213 aa23.2■■□□□ 1.3
VPS51-211ENST00000533487 NCLP19338 710 aaKnown RBP23.19■■□□□ 1.3
VPS51-211ENST00000533487 SARSP49591 514 aaKnown RBP23.19■■□□□ 1.3
VPS51-211ENST00000533487 DEFB103AP81534 67 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 SPECC1Q5M775 1068 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 ADALQ6DHV7 355 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
VPS51-211ENST00000533487 USP49Q70CQ1 688 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 NPAS4Q8IUM7 802 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 ADAM2Q99965 735 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 RUSC1Q9BVN2 902 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 PBX4Q9BYU1 374 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 LRRC27Q9C0I9 530 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 MAGEF1Q9HAY2 307 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 AGPAT5Q9NUQ2 364 aa23.19■■□□□ 1.3
VPS51-211ENST00000533487 RBM19Q9Y4C8 960 aaKnown RBP23.19■■□□□ 1.3
VPS51-211ENST00000533487 LRRIQ4A6NIV6 560 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 H0YCG3 227 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 ERLIN2O94905 339 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 SSBP05455 408 aaKnown RBP eCLIP23.18■■□□□ 1.3
VPS51-211ENST00000533487 DNAJB2P25686 324 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 ABCD1P33897 745 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 STAT6P42226 847 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 RAB27AP51159 221 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 FAM189BP81408 668 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 HTRA4P83105 476 aaPredicted RBP23.18■■□□□ 1.3
VPS51-211ENST00000533487 DMP1Q13316 513 aaPredicted RBP23.18■■□□□ 1.3
VPS51-211ENST00000533487 FAM187BQ17R55 369 aa23.18■■□□□ 1.3
VPS51-211ENST00000533487 MAEAQ7L5Y9 396 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms