RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 KAT6AQ92794 2004 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 MAFO75444 373 aaPredicted RBP20.37■□□□□ 0.85
SMPD1-208ENST00000533123 RFC5P40937 340 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 PSEN2P49810 448 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 CCZ1BP86790 482 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 CCZ1P86791 482 aaPredicted RBP20.37■□□□□ 0.85
SMPD1-208ENST00000533123 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 PSMD2Q13200 908 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 TIPINQ9BVW5 301 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 BICDL2A1A5D9 508 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 KPNA6O60684 536 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 ASGR1P07306 291 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 ZNF484Q5JVG2 852 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 ODR4Q5SWX8 454 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 DRC1Q96MC2 740 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 CTAGE1Q96RT6 745 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 ZMYND15Q9H091 742 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 VPS16Q9H269 839 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 SUGCTQ9HAC7 445 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 SETD4Q9NVD3 440 aa20.36■□□□□ 0.85
SMPD1-208ENST00000533123 HAS3O00219 553 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 ZEB2O60315 1214 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 GAP43P17677 238 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 PPP1R2P41236 205 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 DRP2Q13474 957 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 GRIK4Q16099 956 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 CENPPQ6IPU0 288 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 CCSAPQ6IQ19 270 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 RNF180Q86T96 592 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 GUF1Q8N442 669 aaKnown RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 LRRC71Q8N4P6 559 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 MTG1Q9BT17 334 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 MRPL44Q9H9J2 332 aaKnown RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 PPME1Q9Y570 386 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 SMIM10L2AP0DMW4 78 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 SMIM10L2BP0DMW5 78 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 KLRC1P26715 233 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 COPB1P53618 953 aaKnown RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 SPAG1Q07617 926 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 SPECC1LQ69YQ0 1117 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
SMPD1-208ENST00000533123 LARSQ9P2J5 1176 aaKnown RBP20.35■□□□□ 0.85
SMPD1-208ENST00000533123 LRRC10BA6NIK2 292 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 SKILP12757 684 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 PLS3P13797 630 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 SFPQP23246 707 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 NMT1P30419 496 aaKnown RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 CASP5P51878 434 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 FBXO46Q6PJ61 603 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 METTL13Q8N6R0 699 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 CCDC150Q8NCX0 1101 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 KIFAP3Q92845 792 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 FIZ1Q96SL8 496 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 RNF208Q9H0X6 261 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 POLR3FQ9H1D9 316 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 OLFML3Q9NRN5 406 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 EVPLQ92817 2033 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 C22orf31O95567 290 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 PEX3P56589 373 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 TBX2Q13207 712 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 MKRN4PQ13434 485 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 MARCH8Q5T0T0 291 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 FAM178BQ8IXR5 827 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 MYOCDQ8IZQ8 938 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 PCSK9Q8NBP7 692 aaKnown RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 BSNDQ8WZ55 320 aa20.34■□□□□ 0.85
SMPD1-208ENST00000533123 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
SMPD1-208ENST00000533123 IGKV6-21A0A0C4DH24 114 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 N4BP3O15049 544 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 CCL5P13501 91 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 NOLC1Q14978 699 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMPD1-208ENST00000533123 FILIP1LQ4L180 1135 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 EFCAB12Q6NXP0 572 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 LMBR1Q8WVP7 490 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 DEFB118Q96PH6 123 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 PAK6Q9NQU5 681 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-208ENST00000533123 SEL1LQ9UBV2 794 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 COL1A2P08123 1366 aa20.33■□□□□ 0.85
SMPD1-208ENST00000533123 GCNT3O95395 438 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 MYBP10242 640 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 PBX1P40424 430 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 HIC1Q14526 733 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 HDAC6Q9UBN7 1215 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 NRCAMQ92823 1304 aa20.33■□□□□ 0.84
SMPD1-208ENST00000533123 ARL2P36404 184 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 CLCN3P51790 818 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 MTHFD1LQ6UB35 978 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 NELFCDQ8IXH7 590 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 EXOC8Q8IYI6 725 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
SMPD1-208ENST00000533123 SCN10AQ9Y5Y9 1956 aa20.32■□□□□ 0.84
SMPD1-208ENST00000533123 CCDC169A6NNP5 214 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 ACLYP53396 1101 aa20.31■□□□□ 0.84
SMPD1-208ENST00000533123 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
SMPD1-208ENST00000533123 NBPF20Q3BBV1 942 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms