RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ODF2LQ9ULJ1 636 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 MYMKA6NI61 221 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 GPR182O15218 404 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 TBCAO75347 108 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 FAM13AO94988 1023 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 FGBP02675 491 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 CXCL10P02778 98 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 GHRP10912 638 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 MAGEA10P43363 369 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 NAMPTP43490 491 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 PHKA2P46019 1235 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 SMTNP53814 917 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 PEX3P56589 373 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 NFX1Q12986 1120 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 LPIN1Q14693 890 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 MBTPS1Q14703 1052 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 GPNMBQ14956 572 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 TSHZ1Q6ZSZ6 1077 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 FAM43BQ6ZT52 329 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 DYMQ7RTS9 669 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 DEPTORQ8TB45 409 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 SEPT8Q92599 483 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 STAMQ92783 540 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 REEP2Q9BRK0 252 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZHX3Q9H4I2 956 aa12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 LARSQ9P2J5 1176 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-211ENST00000533012 LRRIQ4A6NIV6 560 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ACRP10323 421 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ACTN1P12814 892 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PLS3P13797 630 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 DARSP14868 501 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 AFMP43652 599 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PTENP60484 403 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 NCBP1Q09161 790 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 MAPK7Q13164 816 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PAK2Q13177 524 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 DMP1Q13316 513 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 CAPSQ13938 189 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PLEKHG4Q58EX7 1191 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZBTB8OSQ8IWT0 167 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 FMR1NBQ8N0W7 255 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 DAW1Q8N136 415 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 DBF4BQ8NFT6 615 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 TMEM40Q8WWA1 233 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 APBB2Q92870 758 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 GDF15Q99988 308 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 NFKBIZQ9BYH8 718 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 IFIH1Q9BYX4 1025 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 C2orf40Q9H1Z8 148 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 AGO3Q9H9G7 860 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 IFT122Q9HBG6 1241 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PARVGQ9HBI0 331 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 KMT5AQ9NQR1 393 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PCDH10Q9P2E7 1040 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 PADI3Q9ULW8 664 aa12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 INO80B-WBP1J3KQ70 363 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 CSDE1O75534 798 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 MYL1P05976 194 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 IDEP14735 1019 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 GAP43P17677 238 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 LIG1P18858 919 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 CD52P31358 61 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 NPTX2P47972 431 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZNF131P52739 623 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 EFNA5P52803 228 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 SNW1Q13573 536 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 IKBKEQ14164 716 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 PCBP1Q15365 356 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 CNKSR3Q6P9H4 555 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 C16orf59Q7L2K0 433 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 CCDC65Q8IXS2 484 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 BSNDQ8WZ55 320 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 KAT6AQ92794 2004 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 DNAJC19Q96DA6 116 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 UBE2OQ9C0C9 1292 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 PANK4Q9NVE7 773 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 ST3GAL5Q9UNP4 418 aa12.41□□□□□ -0.42
TRAPPC4-211ENST00000533012 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms