RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 LOC285556D6RIA3 1793 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 SMCHD1A6NHR9 2005 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 RASSF10A6NK89 507 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM196BA6NMK8 535 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM86B1E9PN63 330 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 GNB5O14775 395 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CETN3O15182 167 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MSH4O15457 936 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 PJA2O43164 708 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CALUO43852 315 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 USO1O60763 962 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MED24O75448 989 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 ICAM1P05362 532 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM86B2P0C5J1 330 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 SPATA31C1P0DKV0 1188 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MAPTP10636 758 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 DPEP1P16444 411 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 PRLRP16471 622 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MCM3P25205 808 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CHRNA4P43681 627 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 DGKGP49619 791 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNF131P52739 623 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CKAP4Q07065 602 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 IKQ13123 557 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 GIT2Q14161 759 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 RRP1BQ14684 758 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MTF1Q14872 753 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 TNIP1Q15025 636 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 BRD3Q15059 726 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 ECM1Q16610 540 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 KNOP1Q1ED39 458 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CEP55Q53EZ4 464 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 PRR16Q569H4 304 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNF569Q5MCW4 686 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 PAPD7Q5XG87 772 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CIAPIN1Q6FI81 312 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 FBXO38Q6PIJ6 1188 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 DYMQ7RTS9 669 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CD163Q86VB7 1156 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CATSPER3Q86XQ3 398 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 KRT222Q8N1A0 295 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 MSANTD4Q8NCY6 345 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 BANK1Q8NDB2 785 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 TRIM58Q8NG06 486 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 UBE2Q2Q8WVN8 375 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 HNRNPLLQ8WVV9 542 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 HOOK2Q96ED9 719 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 HSD17B14Q9BPX1 270 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CARD6Q9BX69 1037 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 GBP3Q9H0R5 595 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 PLCB1Q9NQ66 1216 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 TYW1Q9NV66 732 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 DNAAF2Q9NVR5 837 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-210ENST00000532925 BTNL10A8MVZ5 291 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 TCP10L2B9ZVM9 353 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 E9PMD0 336 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 TRAF5O00463 557 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 MEIS1O00470 390 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 PES1O00541 588 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 WNT10BO00744 389 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 CTNND1O60716 968 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 TBCAO75347 108 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 GFPT2O94808 682 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 LYPLA2O95372 231 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 RFX1P22670 979 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 PRELPP51888 382 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 USP14P54578 494 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 CHMP4BP1P59074 171 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 SNRPFP62306 86 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 HERVK_113P62684 666 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 JAG1P78504 1218 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 GABPB1Q06547 395 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 EPHA7Q15375 998 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 SPA17Q15506 151 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 PTPN21Q16825 1174 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 ERCC6LQ2NKX8 1250 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 USH1GQ495M9 461 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 HERC4Q5GLZ8 1057 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 FAM83BQ5T0W9 1011 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 C10orf76Q5T2E6 689 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 XRRA1Q6P2D8 792 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 PDXDC1Q6P996 788 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 TMCO3Q6UWJ1 677 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 OTOP1Q7RTM1 612 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 TRAPPC11Q7Z392 1133 aa6.28□□□□□ -1.4
ATPAF1-210ENST00000532925 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms