RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DNAJC12Q9UKB3 198 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 CFAP36Q96G28 342 aa15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 NNMTP40261 264 aa15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 ZNF699Q32M78 642 aa15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 SRRM1Q8IYB3 904 aaKnown RBP15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 CFAP61Q8NHU2 1237 aa15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 INTS9Q9NV88 658 aaKnown RBP15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 STRIP2Q9ULQ0 834 aa15.83■□□□□ 0.13
PCDHA9-202ENST00000532602 FAM205CA6NFA0 338 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 HIP1RO75146 1068 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 CAPS2Q9BXY5 557 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 CLGNO14967 610 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 SUN1O94901 812 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 PSMA2P25787 234 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 RWDD2BP57060 319 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 KRT33BQ14525 404 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 BAIAP2L1Q9UHR4 511 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 PVALEFA0A1B0GWK0 134 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 TXNP10599 105 aaKnown RBP15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 PLTPP55058 493 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 MRPS25P82663 173 aaKnown RBP15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 TMEM62Q0P6H9 643 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 CYP4F22Q6NT55 531 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 ALKBH5Q6P6C2 394 aaKnown RBP15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 SLC9A2Q9UBY0 812 aa15.83■□□□□ 0.12
PCDHA9-202ENST00000532602 F5H423 210 aaPredicted RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 MT-ND3P03897 115 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF280CQ8ND82 737 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 HPS3Q969F9 1004 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 CALR3Q96L12 384 aaKnown RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 SENP2Q9HC62 589 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 MGEA5O60502 916 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 SOX5P35711 763 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 KYAT1Q16773 422 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 KLC3Q6P597 504 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 VSTM4Q8IW00 320 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 PSMC5P62195 406 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 BAATQ14032 418 aaPredicted RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 LMBRD2Q68DH5 695 aaPredicted RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 GBP7Q8N8V2 638 aaPredicted RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 STK25O00506 426 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 CELF2O95319 508 aaKnown RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 CHEK2O96017 543 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 ADAM22Q9P0K1 906 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 STAP1Q9ULZ2 295 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 HPCAL4Q9UM19 191 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 STK38LQ9Y2H1 464 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 NDUFB10O96000 172 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 PAMP19021 973 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
PCDHA9-202ENST00000532602 CYP2B6P20813 491 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 TBXAS1P24557 533 aaPredicted RBP15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 SPOPLQ6IQ16 392 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 STYK1Q6J9G0 422 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 TTC13Q8NBP0 860 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 EPB41L5Q9HCM4 733 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 DNAJC17Q9NVM6 304 aaKnown RBP15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 CALB1P05937 261 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 KCTD16Q68DU8 428 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 SLC7A5Q01650 507 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 COG2Q14746 738 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 RBM41Q96IZ5 413 aaKnown RBP15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 ACAP3Q96P50 834 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 EPB41L4AQ9HCS5 686 aaPredicted RBP15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 MROH2AA6NES4 1674 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 PPP2R3CQ969Q6 453 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 ASNSD1Q9NWL6 643 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 ADAMTS1Q9UHI8 967 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 PIK3R2O00459 728 aa15.81■□□□□ 0.12
PCDHA9-202ENST00000532602 TJP3O95049 919 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 CTSHP09668 335 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 YWHABP31946 246 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 MRPL4Q9BYD3 311 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 NVLO15381 856 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 PAPOLAP51003 745 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 ZKSCAN4Q969J2 545 aaPredicted RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 TRIM62Q9BVG3 475 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 MIF4GDA9UHW6 222 aaKnown RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 ADORA2BP29275 332 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 PPME1Q9Y570 386 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 MUM1Q2TAK8 710 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 PPP6R3Q5H9R7 873 aaPredicted RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 CENPUQ71F23 418 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 PANX2Q96RD6 677 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 PIDD1Q9HB75 910 aa15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 JPH1Q9HDC5 661 aaPredicted RBP15.8■□□□□ 0.12
PCDHA9-202ENST00000532602 EPS15L1Q9UBC2 864 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms