RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 B4GALT4O60513 344 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 JAK2O60674 1132 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 S1PR4O95977 384 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 F2P00734 622 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 CD4P01730 458 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM86B2P0C5J1 330 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 ARP10275 920 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 HOXD8P13378 290 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 FDPSP14324 419 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 RAG1P15918 1043 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 NOS2P35228 1153 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 SCTRP47872 440 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 USP11P51784 963 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 EPHA4P54764 986 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 PSMA6P60900 246 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRIM29Q14134 588 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 KIAA0753Q2KHM9 967 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 PRR16Q569H4 304 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 INTS6LQ5JSJ4 861 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 MEI1Q5TIA1 1274 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 VASH1Q7L8A9 365 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 NIPA1Q7RTP0 329 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 PLA2G4DQ86XP0 818 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 CCDC83Q8IWF9 413 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 TBCKQ8TEA7 893 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 CRYGNQ8WXF5 182 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZNF516Q92618 1163 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 KAT2BQ92831 832 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 BADQ92934 168 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 GPR20Q99678 358 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 GDF15Q99988 308 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 LLPHQ9BRT6 129 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 C16orf70Q9BSU1 422 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 UBE2OQ9C0C9 1292 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 AGO4Q9HCK5 861 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 BRMS1Q9HCU9 246 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 JPH1Q9HDC5 661 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 GJB4Q9NTQ9 266 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRMT13Q9NUP7 481 aaKnown RBP6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 TBX21Q9UL17 535 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 MKI67P46013 3256 aaKnown RBP6.52□□□□□ -1.36
HMGB1P42-201ENST00000532126 IGLV3-22A0A075B6J6 115 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 HAS3O00219 553 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 IPO5O00410 1097 aaKnown RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZBTB39O15060 712 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TIMP1P01033 207 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 LGALS2P05162 132 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 KRT18P05783 430 aaKnown RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 USP17L7P0C7H9 530 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 PTMSP20962 102 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ITGB8P26012 769 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 CIITAP33076 1130 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 BMP8BP34820 402 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 KRT2P35908 639 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TCF7P36402 384 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 SOX9P48436 509 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 MCM2P49736 904 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 FPGSQ05932 587 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ST3GAL1Q11201 340 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ITGB3BPQ13352 177 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 NONOQ15233 471 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TCEA2Q15560 299 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 NPY5RQ15761 445 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 PTGISQ16647 500 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TJAP1Q5JTD0 557 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 HABP4Q5JVS0 413 aaKnown RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 SESTD1Q86VW0 696 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 RELL1Q8IUW5 271 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TMEM199Q8N511 208 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 SEPT1Q8WYJ6 367 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 GLG1Q92896 1179 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 KCTD12Q96CX2 325 aaKnown RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 SCYL1Q96KG9 808 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 DNAJC7Q99615 494 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF577Q9BSK1 485 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 HIPK3Q9H422 1215 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TBC1D22BQ9NU19 505 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 HDAC6Q9UBN7 1215 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 SLC9A2Q9UBY0 812 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 ZNF215Q9UL58 517 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 TELO2Q9Y4R8 837 aa6.52□□□□□ -1.37
HMGB1P42-201ENST00000532126 NFASCO94856 1347 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 A0A1W2PPC1 479 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 GSTTP1A0A1W2PQM5 241 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 ALG1L2C9J202 215 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 DDX39AO00148 427 aaKnown RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 TNRC18O15417 2968 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 MMP1P03956 469 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 CYP2C9P11712 490 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 CYP2C18P33260 490 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 EPHB1P54762 984 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 ACTR2P61160 394 aa6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 HMGN5P82970 282 aaKnown RBP6.51□□□□□ -1.37
HMGB1P42-201ENST00000532126 SAFBQ15424 915 aaKnown RBP eCLIP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms