RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TMEM173Q86WV6 379 aaPredicted RBP19.54■□□□□ 0.72
PKP3-208ENST00000531857 C12orf76Q8N812 135 aaPredicted RBP19.54■□□□□ 0.72
PKP3-208ENST00000531857 CCDC12Q8WUD4 166 aaPredicted RBP19.54■□□□□ 0.72
PKP3-208ENST00000531857 NLRP7Q8WX94 980 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 ATOH1Q92858 354 aaPredicted RBP19.54■□□□□ 0.72
PKP3-208ENST00000531857 CXCL14O95715 111 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 ITIH3Q06033 890 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 TBC1D8BQ0IIM8 1120 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 MTMR3Q13615 1198 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 TARBP2Q15633 366 aaKnown RBP19.53■□□□□ 0.72
PKP3-208ENST00000531857 ZNF710Q8N1W2 664 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 FEZF2Q8TBJ5 459 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 AUTS2Q8WXX7 1259 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 BRF1Q92994 677 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 UNC45AQ9H3U1 944 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 SORCS3Q9UPU3 1222 aa19.53■□□□□ 0.72
PKP3-208ENST00000531857 RBM19Q9Y4C8 960 aaKnown RBP19.53■□□□□ 0.72
PKP3-208ENST00000531857 TMEM150BA6NC51 233 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 GAS7O60861 476 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 HMGB1P09429 215 aaKnown RBP19.52■□□□□ 0.72
PKP3-208ENST00000531857 ALDH7A1P49419 539 aaKnown RBP19.52■□□□□ 0.72
PKP3-208ENST00000531857 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 RARS2Q5T160 578 aaKnown RBP19.52■□□□□ 0.72
PKP3-208ENST00000531857 VPS52Q8N1B4 723 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 SLC5A5Q92911 643 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 LPPQ93052 612 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 NECTIN4Q96NY8 510 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 CEP89Q96ST8 783 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 SH2D3AQ9BRG2 576 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 MRPL9Q9BYD2 267 aaKnown RBP19.52■□□□□ 0.72
PKP3-208ENST00000531857 DACT1Q9NYF0 836 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 NID2Q14112 1375 aa19.52■□□□□ 0.72
PKP3-208ENST00000531857 ZC3H11AO75152 810 aaKnown RBP eCLIP19.51■□□□□ 0.71
PKP3-208ENST00000531857 STBD1O95210 358 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 ASGR2P07307 311 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 PHKA2P46019 1235 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 NTRK3Q16288 839 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 LRCH2Q5VUJ6 765 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 UBALD2Q8IYN6 164 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 TMEM105Q8N8V8 129 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 BCL7CQ8WUZ0 217 aaPredicted RBP19.51■□□□□ 0.71
PKP3-208ENST00000531857 TMEM169Q96HH4 297 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 SNX27Q96L92 541 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 RIT2Q99578 217 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 ZBP1Q9H171 429 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 VPS54Q9P1Q0 977 aa19.51■□□□□ 0.71
PKP3-208ENST00000531857 A0A087WZ62 844 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 MEIS3P2A8K0S8 358 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 GALR2O43603 387 aaPredicted RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 EPCAMP16422 314 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 SFNP31947 248 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 MTHFRP42898 656 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 USP11P51784 963 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 JAK3P52333 1124 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 MTERF2Q49AM1 385 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 BICD2Q8TD16 824 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 SLC22A17Q8WUG5 538 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 FDXACB1Q9BRP7 624 aaPredicted RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 TEKT3Q9BXF9 490 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 NIFKQ9BYG3 293 aaKnown RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 GCOM2Q9BZD3 368 aaPredicted RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 IRF2BPLQ9H1B7 796 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 LIMD1Q9UGP4 676 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 SEPT9Q9UHD8 586 aaPredicted RBP19.5■□□□□ 0.71
PKP3-208ENST00000531857 MYO15AQ9UKN7 3530 aa19.5■□□□□ 0.71
PKP3-208ENST00000531857 PSMD10O75832 226 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 KCNB2Q92953 911 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 IGSF21Q96ID5 467 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 JAKMIP1Q96N16 626 aaKnown RBP19.49■□□□□ 0.71
PKP3-208ENST00000531857 TRAIPQ9BWF2 469 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 SLC26A6Q9BXS9 759 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 NRDE2Q9H7Z3 1164 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 CHST12Q9NRB3 414 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 TBC1D13Q9NVG8 400 aa19.49■□□□□ 0.71
PKP3-208ENST00000531857 IGKV6-21A0A0C4DH24 114 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 GALTP07902 379 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 CTSAP10619 480 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 NUBP1P53384 320 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 AKAP17AQ02040 695 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 TWF2Q6IBS0 349 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 KIAA1841Q6NSI8 718 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 DDX53Q86TM3 631 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 KSR1Q8IVT5 923 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 ZDHHC14Q8IZN3 488 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 TDRD5Q8NAT2 981 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 CCDC148Q8NFR7 591 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 VN1R3Q9BXE9 311 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 RNF26Q9BY78 433 aaPredicted RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 NCOA5Q9HCD5 579 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 DNAJB4Q9UDY4 337 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 DBR1Q9UK59 544 aaKnown RBP19.48■□□□□ 0.71
PKP3-208ENST00000531857 INPP5FQ9Y2H2 1132 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 IRAK3Q9Y616 596 aa19.48■□□□□ 0.71
PKP3-208ENST00000531857 B4GALT3O60512 393 aa19.47■□□□□ 0.71
PKP3-208ENST00000531857 CDC45O75419 566 aa19.47■□□□□ 0.71
PKP3-208ENST00000531857 BMS1Q14692 1282 aaKnown RBP19.47■□□□□ 0.71
PKP3-208ENST00000531857 XKR3Q5GH77 459 aa19.47■□□□□ 0.71
PKP3-208ENST00000531857 ATAT1Q5SQI0 421 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms